Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
CASP4P49662 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CASP4P49662 AC022893.2-201ENST00000564832 3296 ntBASIC4.3□□□□□ -1.72
CASP4P49662 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CASP4P49662 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.3□□□□□ -1.72
CASP4P49662 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CASP4P49662 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.3□□□□□ -1.72
CASP4P49662 RPL23AP48-201ENST00000406913 488 ntBASIC4.3□□□□□ -1.72
CASP4P49662 RNA5SP498-201ENST00000411342 120 ntBASIC4.3□□□□□ -1.72
CASP4P49662 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.3□□□□□ -1.72
CASP4P49662 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.3□□□□□ -1.72
CASP4P49662 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.3□□□□□ -1.72
CASP4P49662 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.3□□□□□ -1.72
CASP4P49662 RWDD4P2-201ENST00000426392 563 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.3□□□□□ -1.72
CASP4P49662 HIGD1AP4-201ENST00000430194 280 ntBASIC4.3□□□□□ -1.72
CASP4P49662 KCTD9P3-201ENST00000434597 1169 ntBASIC4.3□□□□□ -1.72
CASP4P49662 HMGB1P37-201ENST00000439613 609 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AC023512.1-201ENST00000444513 499 ntBASIC4.3□□□□□ -1.72
CASP4P49662 RANP8-201ENST00000444720 713 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.3□□□□□ -1.72
CASP4P49662 RPS17P13-201ENST00000448974 407 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.3□□□□□ -1.72
CASP4P49662 AC133473.1-201ENST00000455173 299 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AP002345.1-201ENST00000456493 928 ntBASIC4.3□□□□□ -1.72
CASP4P49662 RWDD4P1-201ENST00000488019 565 ntBASIC4.3□□□□□ -1.72
CASP4P49662 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.3□□□□□ -1.72
CASP4P49662 CDH12P2-201ENST00000504393 298 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.3□□□□□ -1.72
CASP4P49662 NDUFA5P2-201ENST00000519723 344 ntBASIC4.3□□□□□ -1.72
CASP4P49662 IGKV2D-10-201ENST00000520194 281 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.3□□□□□ -1.72
CASP4P49662 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.3□□□□□ -1.72
CASP4P49662 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CASP4P49662 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.3□□□□□ -1.72
CASP4P49662 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.3□□□□□ -1.72
CASP4P49662 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.3□□□□□ -1.72
CASP4P49662 AC020910.2-201ENST00000603635 610 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AC067959.1-201ENST00000604334 379 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.3□□□□□ -1.72
CASP4P49662 AL591424.2-201ENST00000617023 128 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AC073530.2-201ENST00000623987 261 ntBASIC4.3□□□□□ -1.72
CASP4P49662 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CASP4P49662 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.3□□□□□ -1.72
CASP4P49662 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CASP4P49662 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CASP4P49662 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.29□□□□□ -1.72
CASP4P49662 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CASP4P49662 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CASP4P49662 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CASP4P49662 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CASP4P49662 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.29□□□□□ -1.72
CASP4P49662 RNU6-31P-201ENST00000384388 108 ntBASIC4.29□□□□□ -1.72
CASP4P49662 RNU6-603P-201ENST00000411403 107 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.29□□□□□ -1.72
CASP4P49662 RPL7AP73-201ENST00000413490 353 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.29□□□□□ -1.72
CASP4P49662 NIPA2P1-201ENST00000426223 976 ntBASIC4.29□□□□□ -1.72
CASP4P49662 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CASP4P49662 BX119904.1-201ENST00000432026 348 ntBASIC4.29□□□□□ -1.72
CASP4P49662 NDUFA5P10-201ENST00000432147 357 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.29□□□□□ -1.72
CASP4P49662 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CASP4P49662 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.29□□□□□ -1.72
CASP4P49662 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.29□□□□□ -1.72
CASP4P49662 RNU6-1218P-201ENST00000458990 108 ntBASIC4.29□□□□□ -1.72
CASP4P49662 RNU7-27P-201ENST00000459281 62 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AC010627.1-201ENST00000503819 1294 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.29□□□□□ -1.72
CASP4P49662 AC026726.1-201ENST00000512859 601 ntBASIC4.29□□□□□ -1.72
CASP4P49662 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.29□□□□□ -1.72
CASP4P49662 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CASP4P49662 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.29□□□□□ -1.72
CASP4P49662 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.29□□□□□ -1.72
CASP4P49662 AC007224.1-201ENST00000564410 144 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.29□□□□□ -1.72
CASP4P49662 SS18L2P2-201ENST00000583960 235 ntBASIC4.29□□□□□ -1.72
CASP4P49662 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.29□□□□□ -1.72
CASP4P49662 AC073111.2-201ENST00000605657 1075 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AC017076.1-201ENST00000607613 578 ntBASIC4.29□□□□□ -1.72
CASP4P49662 MIR6500-201ENST00000622700 86 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AP006248.2-201ENST00000623309 592 ntBASIC4.29□□□□□ -1.72
CASP4P49662 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.29□□□□□ -1.72
CASP4P49662 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CASP4P49662 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CASP4P49662 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CASP4P49662 AC012020.1-201ENST00000624541 1728 ntBASIC4.29□□□□□ -1.72
CASP4P49662 PNPT1P2-201ENST00000456768 2050 ntBASIC4.28□□□□□ -1.72
CASP4P49662 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CASP4P49662 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASP4P49662 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASP4P49662 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASP4P49662 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CASP4P49662 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.28□□□□□ -1.72
CASP4P49662 RNA5SP515-201ENST00000364570 118 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC087650.1-201ENST00000431445 468 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC245517.2-201ENST00000442890 346 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.28□□□□□ -1.72
CASP4P49662 AC110792.1-201ENST00000491826 472 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms