Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC068831.4-201ENST00000556118 109 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CR1P49238 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.64□□□□□ -1.83
CX3CR1P49238 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CR1P49238 AC234771.5-201ENST00000600161 514 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AC025946.2-201ENST00000603398 234 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AC005191.1-201ENST00000603950 358 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CX3CR1P49238 AL139286.1-201ENST00000604465 483 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AC115621.1-201ENST00000604653 858 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AP003117.2-201ENST00000606010 545 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 RN7SL722P-201ENST00000617780 284 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 RN7SL565P-201ENST00000618246 284 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AP000346.3-201ENST00000622821 210 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AC010435.1-201ENST00000623353 1177 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.64□□□□□ -1.83
CX3CR1P49238 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CR1P49238 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CR1P49238 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CX3CR1P49238 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CR1P49238 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CR1P49238 AC027287.1-201ENST00000553115 1453 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CR1P49238 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 OR11H5P-202ENST00000641612 1325 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 AP001486.2-201ENST00000561652 5113 ntBASIC3.64□□□□□ -1.83
CX3CR1P49238 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CR1P49238 AC009501.3-201ENST00000605001 1352 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CR1P49238 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 AL031985.3-201ENST00000565390 2449 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CR1P49238 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CX3CR1P49238 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 FAM3C2-201ENST00000312214 681 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 RNU6-98P-201ENST00000384173 107 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 RNU1-89P-201ENST00000384592 164 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 MIR142-201ENST00000384835 87 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 HNRNPDP2-201ENST00000406475 478 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 SNORA3C-201ENST00000408792 125 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 ELOCP19-201ENST00000411919 318 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC011933.1-201ENST00000413334 321 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 AL590623.1-201ENST00000427864 105 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.63□□□□□ -1.83
CX3CR1P49238 AL035458.1-201ENST00000433096 585 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 RPL7P28-201ENST00000437739 740 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.63□□□□□ -1.83
CX3CR1P49238 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CR1P49238 RPL36AP13-201ENST00000457490 317 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC116533.1-201ENST00000459748 321 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC109327.1-201ENST00000471666 403 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.63□□□□□ -1.83
CX3CR1P49238 AC008958.1-201ENST00000511047 682 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 IGLVIV-53-201ENST00000520107 367 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.63□□□□□ -1.83
CX3CR1P49238 PTP4A1P6-201ENST00000531034 478 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.63□□□□□ -1.83
CX3CR1P49238 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CR1P49238 AC022655.2-201ENST00000577280 318 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC005242.1-201ENST00000585658 438 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 BX322635.1-201ENST00000605804 496 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC113194.1-201ENST00000606037 500 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC116651.1-201ENST00000609724 556 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AC024023.1-201ENST00000624530 922 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 AP005264.7-201ENST00000625003 745 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 ATE1-AS1-202ENST00000636460 506 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 AL627171.1-201ENST00000618845 1308 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CR1P49238 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CR1P49238 PNPT1P2-201ENST00000456768 2050 ntBASIC3.63□□□□□ -1.83
CX3CR1P49238 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.62□□□□□ -1.83
CX3CR1P49238 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CR1P49238 AL133412.1-201ENST00000380194 2992 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CX3CR1P49238 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CR1P49238 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 RNA5SP322-201ENST00000363617 119 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms