Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TCEA1P2-201ENST00000420496 906 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL12P48061 UBE2V2P1-201ENST00000434717 398 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 CYCSP32-201ENST00000440548 321 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL12P48061 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL12P48061 RN7SL809P-201ENST00000482040 297 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL12P48061 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL12P48061 CCNHP1-201ENST00000513311 678 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 AC138938.1-201ENST00000515431 782 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 AC087369.1-201ENST00000520775 996 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 AC022695.1-201ENST00000522089 237 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL12P48061 AC025857.1-201ENST00000525252 377 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.89□□□□□ -1.79
CXCL12P48061 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.89□□□□□ -1.79
CXCL12P48061 AC006960.3-201ENST00000561845 705 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CXCL12P48061 AC005000.2-201ENST00000605468 310 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 OR2BH1P-201ENST00000608850 864 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 AC243756.2-201ENST00000618406 463 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 AC124312.6-202ENST00000623624 418 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CXCL12P48061 AC083899.2-201ENST00000423285 1376 ntBASIC3.89□□□□□ -1.79
CXCL12P48061 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CXCL12P48061 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL12P48061 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL12P48061 AC245100.2-201ENST00000454544 1679 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CXCL12P48061 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 RNA5SP51-201ENST00000364750 119 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 SNORD96B-201ENST00000386148 79 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 RPS24P12-201ENST00000402084 394 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 DPY19L1P2-201ENST00000426647 915 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 PRELID3BP10-201ENST00000431957 584 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL12P48061 RANP8-201ENST00000444720 713 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL12P48061 RPS3AP46-201ENST00000448352 682 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL12P48061 PSMC1P13-201ENST00000458195 985 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 RPS26P28-201ENST00000470806 348 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.88□□□□□ -1.79
CXCL12P48061 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL12P48061 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL12P48061 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL12P48061 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL12P48061 PDCD5P1-201ENST00000543528 309 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL12P48061 AC079171.1-201ENST00000568788 914 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL12P48061 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.88□□□□□ -1.79
CXCL12P48061 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 AC064801.1-201ENST00000612025 407 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 AC243654.2-201ENST00000612843 443 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL12P48061 AC244258.1-201ENST00000637553 1071 ntBASIC3.88□□□□□ -1.79
CXCL12P48061 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CXCL12P48061 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL12P48061 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CXCL12P48061 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL12P48061 AC107027.3-201ENST00000565095 3473 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL12P48061 RNA5SP267-201ENST00000364893 126 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL12P48061 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CXCL12P48061 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL12P48061 TRIM60P17-201ENST00000415181 719 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 VN1R31P-201ENST00000417498 730 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 CYCSP10-201ENST00000417973 294 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL12P48061 AL158156.1-201ENST00000422509 473 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL12P48061 RAB9AP5-201ENST00000437794 597 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 RAB9AP2-201ENST00000443911 597 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 RPL21P23-201ENST00000446654 460 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 NPM1P39-201ENST00000449818 867 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 AL591473.1-201ENST00000464297 313 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL12P48061 ARL4AP1-201ENST00000503220 705 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL12P48061 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL12P48061 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL12P48061 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL12P48061 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL12P48061 AC011270.1-201ENST00000558606 583 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 AC022968.1-201ENST00000567372 442 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 AC244505.7-201ENST00000599675 272 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL12P48061 AL353600.1-201ENST00000608148 251 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 AC243312.2-201ENST00000623340 601 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms