Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.63□□□□□ -1.67
NEDD4P46934 FAM106CP-201ENST00000582212 507 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 MTCO2P22-201ENST00000603246 681 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 AC019131.2-201ENST00000609071 870 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 AL133445.2-201ENST00000611191 527 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 AL158196.1-201ENST00000616786 434 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 AL645927.2-201ENST00000618350 349 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 FP236240.3-201ENST00000623061 327 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.63□□□□□ -1.67
NEDD4P46934 AP002371.2-201ENST00000624450 503 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.63□□□□□ -1.67
NEDD4P46934 CDRT1-208ENST00000630868 794 ntBASIC4.63□□□□□ -1.67
NEDD4P46934 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.63□□□□□ -1.67
NEDD4P46934 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
NEDD4P46934 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NEDD4P46934 AP002001.2-201ENST00000529025 1469 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD4P46934 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NEDD4P46934 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD4P46934 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD4P46934 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD4P46934 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD4P46934 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD4P46934 RNU2-22P-201ENST00000411266 212 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD4P46934 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.62□□□□□ -1.67
NEDD4P46934 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD4P46934 AC007000.2-201ENST00000442564 487 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD4P46934 CYCSP53-201ENST00000455540 265 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 MTND2P30-201ENST00000456663 382 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.62□□□□□ -1.67
NEDD4P46934 AC091544.1-201ENST00000484702 348 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 AC109458.1-201ENST00000508858 316 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD4P46934 SCARNA14-201ENST00000516903 136 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 HMGB1P46-201ENST00000520062 610 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.62□□□□□ -1.67
NEDD4P46934 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD4P46934 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD4P46934 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.62□□□□□ -1.67
NEDD4P46934 AC090079.2-201ENST00000575289 768 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 TMF1P1-201ENST00000576058 373 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 MIR4286-201ENST00000580651 93 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 AC022916.3-201ENST00000592961 742 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 AC015849.2-201ENST00000605738 409 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 AC242628.1-201ENST00000606810 391 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD4P46934 AC087190.4-201ENST00000574616 8334 ntBASIC4.62□□□□□ -1.67
NEDD4P46934 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD4P46934 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD4P46934 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NEDD4P46934 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD4P46934 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD4P46934 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD4P46934 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD4P46934 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD4P46934 AC110792.3-201ENST00000595906 1614 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 SPATA2P1-201ENST00000431223 2055 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD4P46934 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NEDD4P46934 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NEDD4P46934 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NEDD4P46934 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD4P46934 LAP3P1-201ENST00000403648 294 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 RANP4-201ENST00000413361 655 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 MTCYBP29-201ENST00000436327 1006 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 OR9M1P-201ENST00000459641 921 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 AC034244.2-201ENST00000514668 858 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 MTND1P36-201ENST00000522384 936 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD4P46934 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD4P46934 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.61□□□□□ -1.67
NEDD4P46934 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.61□□□□□ -1.67
NEDD4P46934 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.61□□□□□ -1.67
NEDD4P46934 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD4P46934 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.61□□□□□ -1.67
NEDD4P46934 AC106785.1-201ENST00000565935 262 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.61□□□□□ -1.67
NEDD4P46934 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.61□□□□□ -1.67
NEDD4P46934 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
NEDD4P46934 AL451049.1-201ENST00000608672 497 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 AC128687.2-201ENST00000609657 566 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 AL591424.2-201ENST00000617023 128 ntBASIC4.61□□□□□ -1.67
NEDD4P46934 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NEDD4P46934 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD4P46934 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD4P46934 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD4P46934 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD4P46934 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NEDD4P46934 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD4P46934 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD4P46934 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD4P46934 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD4P46934 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NEDD4P46934 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD4P46934 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NEDD4P46934 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD4P46934 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms