Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 UBE2FP2-201ENST00000566646 462 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AC015912.2-201ENST00000571053 181 ntBASIC4.71□□□□□ -1.66
HADHAP40939 MIR4458-201ENST00000578872 75 ntBASIC4.71□□□□□ -1.66
HADHAP40939 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.71□□□□□ -1.66
HADHAP40939 RPL7P50-201ENST00000600588 727 ntBASIC4.71□□□□□ -1.66
HADHAP40939 BNIP3P39-201ENST00000601077 554 ntBASIC4.71□□□□□ -1.66
HADHAP40939 Z82195.1-201ENST00000604558 398 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AP004247.3-201ENST00000608682 624 ntBASIC4.71□□□□□ -1.66
HADHAP40939 AL023881.1-201ENST00000621088 301 ntBASIC4.71□□□□□ -1.66
HADHAP40939 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HADHAP40939 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.71□□□□□ -1.66
HADHAP40939 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HADHAP40939 AL645568.2-201ENST00000432815 1337 ntBASIC4.71□□□□□ -1.66
HADHAP40939 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 AL672167.1-203ENST00000641299 2975 ntBASIC4.7□□□□□ -1.66
HADHAP40939 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HADHAP40939 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HADHAP40939 IL6STP1-201ENST00000346911 1020 ntBASIC4.7□□□□□ -1.66
HADHAP40939 MIR192-201ENST00000384915 110 ntBASIC4.7□□□□□ -1.66
HADHAP40939 Z98745.1-201ENST00000402553 494 ntBASIC4.7□□□□□ -1.66
HADHAP40939 PRRC2CP1-201ENST00000404428 159 ntBASIC4.7□□□□□ -1.66
HADHAP40939 RSU1P3-201ENST00000412878 835 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.7□□□□□ -1.66
HADHAP40939 OR51A3P-201ENST00000413596 924 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 AC004448.2-201ENST00000422360 586 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.7□□□□□ -1.66
HADHAP40939 AC092634.2-201ENST00000428146 1010 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AC105402.2-201ENST00000438503 358 ntBASIC4.7□□□□□ -1.66
HADHAP40939 PTGES3P1-201ENST00000439531 483 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AL138878.2-201ENST00000440581 1241 ntBASIC4.7□□□□□ -1.66
HADHAP40939 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.7□□□□□ -1.66
HADHAP40939 CEACAMP9-201ENST00000442990 513 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.7□□□□□ -1.66
HADHAP40939 RPS27AP15-201ENST00000447672 466 ntBASIC4.7□□□□□ -1.66
HADHAP40939 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.7□□□□□ -1.66
HADHAP40939 snoU109.3-201ENST00000459477 145 ntBASIC4.7□□□□□ -1.66
HADHAP40939 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 DEFB109F-201ENST00000491870 277 ntBASIC4.7□□□□□ -1.66
HADHAP40939 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.7□□□□□ -1.66
HADHAP40939 AC113430.1-201ENST00000506872 718 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AC118282.2-201ENST00000508739 374 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AC021146.3-201ENST00000511911 260 ntBASIC4.7□□□□□ -1.66
HADHAP40939 HIGD1AP6-201ENST00000521833 279 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.7□□□□□ -1.66
HADHAP40939 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.7□□□□□ -1.66
HADHAP40939 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.7□□□□□ -1.66
HADHAP40939 AC087897.1-201ENST00000550134 156 ntBASIC4.7□□□□□ -1.66
HADHAP40939 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.7□□□□□ -1.66
HADHAP40939 AC091042.1-201ENST00000579213 173 ntBASIC4.7□□□□□ -1.66
HADHAP40939 MIR4270-201ENST00000581799 70 ntBASIC4.7□□□□□ -1.66
HADHAP40939 OR1AB1P-201ENST00000585564 761 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AP001542.2-201ENST00000593141 364 ntBASIC4.7□□□□□ -1.66
HADHAP40939 RPAP2P1-201ENST00000603626 1168 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.7□□□□□ -1.66
HADHAP40939 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HADHAP40939 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HADHAP40939 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.7□□□□□ -1.66
HADHAP40939 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.7□□□□□ -1.66
HADHAP40939 AL133412.1-201ENST00000380194 2992 ntBASIC4.7□□□□□ -1.66
HADHAP40939 AL136964.1-201ENST00000622038 2990 ntBASIC4.7□□□□□ -1.66
HADHAP40939 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HADHAP40939 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HADHAP40939 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HADHAP40939 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HADHAP40939 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 RNA5SP191-201ENST00000362585 102 ntBASIC4.69□□□□□ -1.66
HADHAP40939 RNU1-20P-201ENST00000363314 162 ntBASIC4.69□□□□□ -1.66
HADHAP40939 RNVU1-6-201ENST00000364688 164 ntBASIC4.69□□□□□ -1.66
HADHAP40939 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 AL603865.2-201ENST00000401679 213 ntBASIC4.69□□□□□ -1.66
HADHAP40939 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.69□□□□□ -1.66
HADHAP40939 AC234064.1-201ENST00000436312 247 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.69□□□□□ -1.66
HADHAP40939 AC005154.2-201ENST00000438110 379 ntBASIC4.69□□□□□ -1.66
HADHAP40939 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 AC004865.1-201ENST00000442276 1003 ntBASIC4.69□□□□□ -1.66
HADHAP40939 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.69□□□□□ -1.66
HADHAP40939 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AC005008.1-201ENST00000456151 612 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 RPL21P71-201ENST00000465598 459 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms