Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A4P31645 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 MTND5P24-201ENST00000438892 1767 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC6A4P31645 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SLC6A4P31645 MTND4P26-201ENST00000415971 1359 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 TCP11X1-202ENST00000622971 1372 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SLC6A4P31645 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC6A4P31645 RNU6-500P-201ENST00000362349 107 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 RN7SKP103-201ENST00000363848 320 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 Y_RNA.599-201ENST00000410489 109 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 OR2AM1P-201ENST00000422137 422 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 DLGAP5P1-201ENST00000430307 464 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 RPL7AP61-201ENST00000443410 636 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 OR7E125P-201ENST00000443450 846 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AL035551.1-201ENST00000446931 348 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 RPS27AP15-201ENST00000447672 466 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 OR52E3P-201ENST00000452083 936 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AL133244.1-201ENST00000456007 258 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 SETP11-201ENST00000473027 690 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 RN7SL591P-201ENST00000496150 292 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AC140172.1-201ENST00000502928 141 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC108471.1-201ENST00000513977 287 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC6A4P31645 RNA5SP228-201ENST00000516232 133 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC008562.1-201ENST00000521763 330 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AC012339.2-201ENST00000523996 453 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AP001922.4-201ENST00000526967 290 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AP001189.2-201ENST00000527320 189 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.19□□□□□ -1.58
SLC6A4P31645 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC008033.2-201ENST00000542626 177 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 PRPF19P1-201ENST00000584766 898 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.19□□□□□ -1.58
SLC6A4P31645 VN1R92P-201ENST00000598511 928 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 WISP1-OT1-201ENST00000602893 642 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 AC087783.2-201ENST00000605070 562 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC6A4P31645 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 PCMTD1P7-201ENST00000634506 357 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 ATE1-AS1-202ENST00000636460 506 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
SLC6A4P31645 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC011447.7-201ENST00000624228 1590 ntBASIC5.19□□□□□ -1.58
SLC6A4P31645 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC6A4P31645 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A4P31645 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A4P31645 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SLC6A4P31645 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC6A4P31645 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SLC6A4P31645 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 Y_RNA.18-201ENST00000362461 102 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 RNU5D-1-201ENST00000363299 116 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 SNORA26.8-201ENST00000391306 124 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AF186996.5-201ENST00000418098 904 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms