Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP1P30622 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP1P30622 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP1P30622 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CLIP1P30622 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.84□□□□□ -1.48
CLIP1P30622 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.48
CLIP1P30622 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP1P30622 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP1P30622 MIR218-2-201ENST00000385006 110 ntBASIC5.83□□□□□ -1.48
CLIP1P30622 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.83□□□□□ -1.48
CLIP1P30622 OR5B10P-201ENST00000532869 642 ntBASIC5.83□□□□□ -1.48
CLIP1P30622 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.83□□□□□ -1.48
CLIP1P30622 AC023161.2-201ENST00000551218 780 ntBASIC5.83□□□□□ -1.48
CLIP1P30622 AC006960.3-201ENST00000561845 705 ntBASIC5.83□□□□□ -1.48
CLIP1P30622 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP1P30622 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP1P30622 AC243654.2-201ENST00000612843 443 ntBASIC5.83□□□□□ -1.48
CLIP1P30622 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP1P30622 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CLIP1P30622 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.83□□□□□ -1.48
CLIP1P30622 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.83□□□□□ -1.48
CLIP1P30622 AL356274.2-201ENST00000624379 3752 ntBASIC5.83□□□□□ -1.48
CLIP1P30622 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CLIP1P30622 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
CLIP1P30622 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP1P30622 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP1P30622 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP1P30622 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP1P30622 MYL12AP1-201ENST00000518490 515 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.82□□□□□ -1.48
CLIP1P30622 HMGN2P47-201ENST00000559378 272 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CLIP1P30622 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP1P30622 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP1P30622 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP1P30622 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP1P30622 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP1P30622 LINC02471-203ENST00000641941 4752 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP1P30622 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP1P30622 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLIP1P30622 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP1P30622 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP1P30622 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CLIP1P30622 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP1P30622 AC245054.1-201ENST00000420944 258 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 AL590609.2-201ENST00000421430 368 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 NANOGP6-201ENST00000429190 847 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP1P30622 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP1P30622 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CLIP1P30622 AC026427.2-201ENST00000506228 536 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 HMGB1P19-201ENST00000517578 577 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP1P30622 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.82□□□□□ -1.48
CLIP1P30622 AL031985.2-201ENST00000600955 480 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 AL392088.2-201ENST00000637607 285 ntBASIC5.82□□□□□ -1.48
CLIP1P30622 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
CLIP1P30622 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP1P30622 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
CLIP1P30622 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP1P30622 AC234772.1-201ENST00000377927 937 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLIP1P30622 ATP5JP1-201ENST00000431631 322 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 RPSAP41-201ENST00000439695 860 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 RN7SL601P-201ENST00000471221 293 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 RN7SKP209-201ENST00000516888 304 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 DUX4L52-201ENST00000549363 777 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 SETP1-201ENST00000556014 845 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 TRAV15-201ENST00000556680 249 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP1P30622 AC037471.2-201ENST00000564941 598 ntBASIC5.81□□□□□ -1.48
CLIP1P30622 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP1P30622 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP1P30622 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP1P30622 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLIP1P30622 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.8□□□□□ -1.48
CLIP1P30622 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP1P30622 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP1P30622 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CLIP1P30622 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP1P30622 SDCBPP2-201ENST00000424643 885 ntBASIC5.8□□□□□ -1.48
CLIP1P30622 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.8□□□□□ -1.48
CLIP1P30622 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.8□□□□□ -1.48
CLIP1P30622 AC069499.1-201ENST00000489433 509 ntBASIC5.8□□□□□ -1.48
CLIP1P30622 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.8□□□□□ -1.48
CLIP1P30622 BTF3L4P4-201ENST00000506381 449 ntBASIC5.8□□□□□ -1.48
CLIP1P30622 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.8□□□□□ -1.48
CLIP1P30622 AC093014.1-201ENST00000548926 724 ntBASIC5.8□□□□□ -1.48
CLIP1P30622 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP1P30622 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.8□□□□□ -1.48
CLIP1P30622 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP1P30622 AL355596.1-201ENST00000565399 3996 ntBASIC5.8□□□□□ -1.48
CLIP1P30622 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.79□□□□□ -1.48
CLIP1P30622 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP1P30622 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP1P30622 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP1P30622 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP1P30622 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLIP1P30622 RNA5SP267-201ENST00000364893 126 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms