Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP1P23763 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP1P23763 AC007537.1-201ENST00000539347 327 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP1P23763 AC005479.1-201ENST00000554629 451 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.6□□□□□ -1.51
VAMP1P23763 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.6□□□□□ -1.51
VAMP1P23763 CTSLP2-201ENST00000580501 394 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP1P23763 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
VAMP1P23763 GLUD1P4-201ENST00000590914 418 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP1P23763 AC025449.1-201ENST00000603896 529 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AP001554.1-201ENST00000604533 376 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AP001330.5-201ENST00000607176 411 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 EIF3FP1-201ENST00000613970 806 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 ELMO2P1-202ENST00000614283 794 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 AC026468.1-201ENST00000614981 107 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.6□□□□□ -1.51
VAMP1P23763 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP1P23763 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP1P23763 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP1P23763 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP1P23763 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 CASC19-228ENST00000641414 1684 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP1P23763 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP1P23763 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP1P23763 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP1P23763 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP1P23763 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP1P23763 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP1P23763 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP1P23763 LCN1P2-201ENST00000372030 223 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 ARMCX7P-201ENST00000372828 562 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 RNU1-39P-201ENST00000383897 165 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 RNU6-876P-201ENST00000391295 104 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 DBIP1-201ENST00000401435 260 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 RPL21P67-201ENST00000402896 478 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP1P23763 RNU2-43P-201ENST00000410306 190 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 RNA5SP115-201ENST00000411160 107 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.59□□□□□ -1.51
VAMP1P23763 JKAMPP1-201ENST00000413804 919 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP1P23763 HMGB3P20-201ENST00000417997 600 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 ZNF90P2-204ENST00000419323 1075 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 RPL23AP38-201ENST00000423801 469 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP1P23763 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.59□□□□□ -1.51
VAMP1P23763 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP1P23763 ATP5JP1-201ENST00000431631 322 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 RPS20P5-201ENST00000434808 360 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 RPSAP49-201ENST00000445182 886 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 DPPA3P1-201ENST00000448050 469 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP1P23763 AC006480.1-201ENST00000449887 378 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 MTND3P10-201ENST00000450967 341 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 SNORD108-201ENST00000459332 71 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP1P23763 RPS26P11-201ENST00000463445 348 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 AC112484.3-201ENST00000505910 329 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 RNU6-390P-201ENST00000516259 103 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 IGLVV-66-201ENST00000523818 341 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP1P23763 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP1P23763 AC118273.2-201ENST00000532092 465 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 AC018523.1-201ENST00000534211 512 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP1P23763 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP1P23763 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP1P23763 AC034105.3-201ENST00000565294 442 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP1P23763 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP1P23763 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.59□□□□□ -1.51
VAMP1P23763 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 OR7E94P-202ENST00000601375 790 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 AL445222.1-201ENST00000607259 628 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 AC005609.4-201ENST00000625071 447 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 AC099654.14-201ENST00000638599 341 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP1P23763 AC011504.1-201ENST00000623331 4103 ntBASIC5.59□□□□□ -1.51
VAMP1P23763 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP1P23763 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VAMP1P23763 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.59□□□□□ -1.52
VAMP1P23763 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
VAMP1P23763 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
VAMP1P23763 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.58□□□□□ -1.52
VAMP1P23763 AL591135.1-201ENST00000401578 5914 ntBASIC5.58□□□□□ -1.52
VAMP1P23763 Z97989.1-201ENST00000531702 2421 ntBASIC5.58□□□□□ -1.52
VAMP1P23763 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms