Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL3P19876 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL3P19876 AC008782.1-201ENST00000603386 430 ntBASIC3.27□□□□□ -1.89
CXCL3P19876 AL355816.1-201ENST00000607951 118 ntBASIC3.27□□□□□ -1.89
CXCL3P19876 AC005021.1-201ENST00000608730 355 ntBASIC3.27□□□□□ -1.89
CXCL3P19876 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL3P19876 AC117490.2-201ENST00000610042 594 ntBASIC3.27□□□□□ -1.89
CXCL3P19876 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL3P19876 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL3P19876 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.27□□□□□ -1.89
CXCL3P19876 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CXCL3P19876 OR5AC4P-202ENST00000642086 985 ntBASIC3.27□□□□□ -1.89
CXCL3P19876 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL3P19876 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
CXCL3P19876 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL3P19876 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.27□□□□□ -1.89
CXCL3P19876 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL3P19876 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CXCL3P19876 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 AC007685.1-201ENST00000329806 452 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CXCL3P19876 U3.15-201ENST00000365398 212 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL3P19876 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL3P19876 NRBF2P2-201ENST00000413087 861 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 TMSB10P2-201ENST00000416049 131 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 RPS12P23-201ENST00000419579 400 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 OR5AW1P-201ENST00000426334 1006 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 USP9YP9-201ENST00000429406 715 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 RPL23AP46-201ENST00000438548 490 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AL353093.1-201ENST00000441292 436 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 PHBP16-201ENST00000446318 950 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL3P19876 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 RPL21P126-201ENST00000470049 478 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 RPS3AP50-201ENST00000487064 803 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 RPL7P47-201ENST00000497299 556 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.26□□□□□ -1.89
CXCL3P19876 SNORA70.14-201ENST00000516205 110 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 RNA5SP519-201ENST00000516480 119 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 OR5D15P-201ENST00000531671 942 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AC011602.1-201ENST00000546484 331 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL3P19876 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL3P19876 AP001180.3-201ENST00000582221 145 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL3P19876 VN1R79P-201ENST00000593540 513 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 AC068790.7-201ENST00000602347 528 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AC013244.1-201ENST00000604279 193 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL3P19876 AC113403.1-201ENST00000604910 193 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL3P19876 AC091953.3-201ENST00000623220 236 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 AC116563.2-201ENST00000624751 535 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CXCL3P19876 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL3P19876 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 AC015813.6-201ENST00000624409 5808 ntBASIC3.26□□□□□ -1.89
CXCL3P19876 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL3P19876 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL3P19876 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL3P19876 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL3P19876 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CXCL3P19876 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL3P19876 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL3P19876 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL3P19876 OR4K15-201ENST00000305051 1216 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 RNU6-618P-201ENST00000363518 112 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CXCL3P19876 MIR550A3-201ENST00000390735 95 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL3P19876 LIPT1P1-201ENST00000415870 1186 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL3P19876 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 AL590762.4-201ENST00000425885 253 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL3P19876 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL3P19876 MTCO1P45-201ENST00000431457 267 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CXCL3P19876 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL3P19876 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL3P19876 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.25□□□□□ -1.89
CXCL3P19876 NDUFA5P12-201ENST00000503796 343 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 AC110768.1-201ENST00000509222 400 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL3P19876 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL3P19876 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL3P19876 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL3P19876 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL3P19876 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.25□□□□□ -1.89
CXCL3P19876 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL3P19876 AC084783.1-201ENST00000565846 910 ntBASIC3.25□□□□□ -1.89
CXCL3P19876 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms