Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC231759.1-201ENST00000616455 597 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 AL158196.1-201ENST00000616786 434 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB1P09429 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 MTND2P41-201ENST00000637599 773 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 SAMMSON-227ENST00000642114 1199 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB1P09429 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB1P09429 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB1P09429 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB1P09429 AC011447.7-201ENST00000624228 1590 ntBASIC5.97□□□□□ -1.45
HMGB1P09429 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGB1P09429 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.96□□□□□ -1.45
HMGB1P09429 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGB1P09429 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HMGB1P09429 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.96□□□□□ -1.45
HMGB1P09429 THAP12P4-201ENST00000528321 2266 ntBASIC5.96□□□□□ -1.45
HMGB1P09429 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.45
HMGB1P09429 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB1P09429 AC100778.3-201ENST00000580060 1750 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB1P09429 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB1P09429 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB1P09429 SNORD116-12-201ENST00000384468 92 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 AC016769.3-201ENST00000396562 315 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 AL024474.1-201ENST00000404655 591 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 RSL24D1P1-201ENST00000404972 493 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 AL583834.1-201ENST00000406943 343 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 RNU2-42P-201ENST00000410697 113 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 AL139128.1-201ENST00000413921 941 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB1P09429 TOMM22P1-201ENST00000418578 312 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 GTF2IP23-201ENST00000423746 351 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB1P09429 CENPIP1-201ENST00000425713 902 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB1P09429 MOB1AP1-201ENST00000430903 535 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 OR7E125P-201ENST00000443450 846 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB1P09429 AC010733.1-201ENST00000451515 401 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 RN7SL222P-201ENST00000476452 299 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB1P09429 RPL23AP55-201ENST00000498163 452 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB1P09429 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 AC027309.2-201ENST00000520566 192 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.96□□□□□ -1.46
HMGB1P09429 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB1P09429 NMNAT1P1-201ENST00000554095 876 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB1P09429 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB1P09429 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB1P09429 AC092184.1-201ENST00000625042 715 ntBASIC5.96□□□□□ -1.46
HMGB1P09429 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB1P09429 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB1P09429 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HMGB1P09429 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB1P09429 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
HMGB1P09429 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB1P09429 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB1P09429 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB1P09429 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HMGB1P09429 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HMGB1P09429 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB1P09429 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB1P09429 snoZ40.1-201ENST00000364540 72 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HMGB1P09429 RNU6-730P-201ENST00000383954 104 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 LRRC37BP1-201ENST00000398851 714 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB1P09429 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB1P09429 AC012519.1-201ENST00000424588 610 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 AC005033.1-201ENST00000428904 813 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB1P09429 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGB1P09429 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGB1P09429 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB1P09429 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGB1P09429 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGB1P09429 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB1P09429 GTF3AP5-201ENST00000442645 697 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 AC073587.1-201ENST00000447093 876 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 PNPLA4P1-201ENST00000458328 305 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 snoU109.3-201ENST00000459477 145 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 AC092757.1-201ENST00000467293 467 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB1P09429 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB1P09429 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB1P09429 AC010350.1-201ENST00000504908 231 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 HIGD1AP14-201ENST00000507617 282 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGB1P09429 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGB1P09429 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB1P09429 MIR4489-201ENST00000578869 62 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB1P09429 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms