Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC108729.1-201ENST00000487812 947 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.57□□□□□ -1.68
COL2A1P02458 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.57□□□□□ -1.68
COL2A1P02458 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL2A1P02458 RN7SKP13-201ENST00000515933 244 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL2A1P02458 AC093524.1-201ENST00000564266 1094 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 MIR4513-201ENST00000581077 86 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.57□□□□□ -1.68
COL2A1P02458 RNU1-30P-201ENST00000606575 163 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 AL391497.1-201ENST00000608671 547 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 AC027449.1-201ENST00000608890 407 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 MIR3651-201ENST00000630427 90 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 AL034408.1-202ENST00000636088 415 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 AL773545.4-201ENST00000637262 310 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 AL513478.4-201ENST00000641636 310 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL2A1P02458 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL2A1P02458 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL2A1P02458 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
COL2A1P02458 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL2A1P02458 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.57□□□□□ -1.68
COL2A1P02458 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 RNF2P1-201ENST00000442955 1010 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 UBE2V1P12-201ENST00000503954 474 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 FTH1P11-201ENST00000517577 551 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.56□□□□□ -1.68
COL2A1P02458 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.56□□□□□ -1.68
COL2A1P02458 KATNBL1P1-201ENST00000605192 748 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.56□□□□□ -1.68
COL2A1P02458 AL391834.2-201ENST00000609982 546 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AC015722.2-201ENST00000622210 551 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.56□□□□□ -1.68
COL2A1P02458 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.56□□□□□ -1.68
COL2A1P02458 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
COL2A1P02458 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL2A1P02458 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL2A1P02458 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.56□□□□□ -1.68
COL2A1P02458 RANP8-201ENST00000444720 713 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC115115.1-201ENST00000449927 248 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.56□□□□□ -1.68
COL2A1P02458 OR7L1P-201ENST00000456181 380 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AC008481.1-201ENST00000463278 396 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC098862.1-201ENST00000504991 413 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 WBP1LP4-201ENST00000505043 344 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 OR4R2P-201ENST00000530815 597 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC024224.1-201ENST00000538284 609 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.56□□□□□ -1.68
COL2A1P02458 AC098483.2-201ENST00000603158 454 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AL391834.1-201ENST00000609609 560 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AL050303.3-201ENST00000613704 284 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 MIR7975-201ENST00000619350 68 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 AP000484.1-201ENST00000620067 1252 ntBASIC4.56□□□□□ -1.68
COL2A1P02458 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.56□□□□□ -1.68
COL2A1P02458 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL2A1P02458 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.55□□□□□ -1.68
COL2A1P02458 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.55□□□□□ -1.68
COL2A1P02458 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL2A1P02458 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL2A1P02458 AC139713.2-215ENST00000641428 5037 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.55□□□□□ -1.68
COL2A1P02458 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL2A1P02458 RNU1-108P-201ENST00000362556 161 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.55□□□□□ -1.68
COL2A1P02458 MIR620-201ENST00000385232 95 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 AF228730.1-201ENST00000397972 663 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 RNA5SP146-201ENST00000410743 123 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.55□□□□□ -1.68
COL2A1P02458 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.55□□□□□ -1.68
COL2A1P02458 RPL17P35-201ENST00000432217 549 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 AL159987.2-201ENST00000432754 307 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.55□□□□□ -1.68
COL2A1P02458 MTCO3P43-201ENST00000440974 771 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.55□□□□□ -1.68
COL2A1P02458 RPL31P61-201ENST00000496160 376 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.55□□□□□ -1.68
COL2A1P02458 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.55□□□□□ -1.68
COL2A1P02458 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms