Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL1A1P02452 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL1A1P02452 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL1A1P02452 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL1A1P02452 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.49□□□□□ -1.69
COL1A1P02452 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
COL1A1P02452 IPO8P1-201ENST00000455509 3109 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
COL1A1P02452 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.49□□□□□ -1.69
COL1A1P02452 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL1A1P02452 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
COL1A1P02452 RNA5SP39-201ENST00000411245 120 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC017078.1-201ENST00000416146 368 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC087650.1-201ENST00000431445 468 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.49□□□□□ -1.69
COL1A1P02452 AC092447.2-201ENST00000435487 669 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC073587.1-201ENST00000447093 876 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 EIF4A1P11-201ENST00000451239 222 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 HMGB3P22-202ENST00000451823 572 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 OR52Y1P-201ENST00000452418 828 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC010469.1-201ENST00000463864 576 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 RPL23AP12-201ENST00000467573 473 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.49□□□□□ -1.69
COL1A1P02452 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.49□□□□□ -1.69
COL1A1P02452 MYL12AP1-201ENST00000518490 515 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC106782.4-201ENST00000568264 210 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.49□□□□□ -1.69
COL1A1P02452 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.49□□□□□ -1.69
COL1A1P02452 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.49□□□□□ -1.69
COL1A1P02452 AL392088.2-201ENST00000637607 285 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.49□□□□□ -1.69
COL1A1P02452 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL1A1P02452 LINC01109-201ENST00000603837 3081 ntBASIC4.48□□□□□ -1.69
COL1A1P02452 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.48□□□□□ -1.69
COL1A1P02452 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.48□□□□□ -1.69
COL1A1P02452 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL1A1P02452 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.48□□□□□ -1.69
COL1A1P02452 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.48□□□□□ -1.69
COL1A1P02452 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL1A1P02452 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.48□□□□□ -1.69
COL1A1P02452 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL1A1P02452 RNU1-33P-201ENST00000364249 162 ntBASIC4.48□□□□□ -1.69
COL1A1P02452 RNA5SP104-201ENST00000410989 118 ntBASIC4.48□□□□□ -1.69
COL1A1P02452 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.48□□□□□ -1.69
COL1A1P02452 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.48□□□□□ -1.69
COL1A1P02452 AC008481.1-201ENST00000463278 396 ntBASIC4.48□□□□□ -1.69
COL1A1P02452 UBA52P3-201ENST00000491303 382 ntBASIC4.48□□□□□ -1.69
COL1A1P02452 HSPD1P15-201ENST00000505573 1122 ntBASIC4.48□□□□□ -1.69
COL1A1P02452 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.48□□□□□ -1.69
COL1A1P02452 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.48□□□□□ -1.69
COL1A1P02452 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.48□□□□□ -1.69
COL1A1P02452 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.48□□□□□ -1.69
COL1A1P02452 AP001002.2-201ENST00000625137 386 ntBASIC4.48□□□□□ -1.69
COL1A1P02452 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL1A1P02452 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.47□□□□□ -1.69
COL1A1P02452 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL1A1P02452 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL1A1P02452 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL1A1P02452 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL1A1P02452 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL1A1P02452 BX119904.1-201ENST00000432026 348 ntBASIC4.47□□□□□ -1.69
COL1A1P02452 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.47□□□□□ -1.69
COL1A1P02452 CYCSP35-201ENST00000451978 304 ntBASIC4.47□□□□□ -1.69
COL1A1P02452 AC104849.1-201ENST00000462623 405 ntBASIC4.47□□□□□ -1.69
COL1A1P02452 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.47□□□□□ -1.69
COL1A1P02452 SETP14-201ENST00000497538 873 ntBASIC4.47□□□□□ -1.69
COL1A1P02452 AC108941.1-201ENST00000502853 530 ntBASIC4.47□□□□□ -1.69
COL1A1P02452 HMGB1P19-201ENST00000517578 577 ntBASIC4.47□□□□□ -1.69
COL1A1P02452 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.47□□□□□ -1.69
COL1A1P02452 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.47□□□□□ -1.69
COL1A1P02452 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.47□□□□□ -1.69
COL1A1P02452 OOSP1P2-201ENST00000579644 351 ntBASIC4.47□□□□□ -1.69
COL1A1P02452 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.47□□□□□ -1.69
COL1A1P02452 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.47□□□□□ -1.69
COL1A1P02452 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL1A1P02452 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL1A1P02452 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL1A1P02452 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
COL1A1P02452 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.46□□□□□ -1.69
COL1A1P02452 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL1A1P02452 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL1A1P02452 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
COL1A1P02452 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL1A1P02452 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 OR6K3-202ENST00000368146 996 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 OR52E6-202ENST00000379946 954 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 RNA5SP424-201ENST00000390988 115 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 DPY19L1P2-201ENST00000426647 915 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 ATP5JP1-201ENST00000431631 322 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 NDUFB1P1-201ENST00000435191 180 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 RPS4XP10-201ENST00000465034 731 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.46□□□□□ -1.7
COL1A1P02452 TRBV12-2-201ENST00000489763 344 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms