Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.87□□□□□ -1.79
SEMA3DO95025 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.87□□□□□ -1.79
SEMA3DO95025 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SEMA3DO95025 AC023043.4-201ENST00000612081 449 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.87□□□□□ -1.79
SEMA3DO95025 OR52H1-202ENST00000641796 1061 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.87□□□□□ -1.79
SEMA3DO95025 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEMA3DO95025 AC025125.1-201ENST00000624743 1922 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEMA3DO95025 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SEMA3DO95025 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.87□□□□□ -1.79
SEMA3DO95025 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEMA3DO95025 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SEMA3DO95025 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SEMA3DO95025 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.86□□□□□ -1.79
SEMA3DO95025 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
SEMA3DO95025 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.86□□□□□ -1.79
SEMA3DO95025 Z82217.1-201ENST00000625157 8149 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SEMA3DO95025 OR11H4-201ENST00000315409 1082 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEMA3DO95025 RNU11-4P-201ENST00000391149 133 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 ENSAP1-201ENST00000392855 326 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 RPS27AP11-201ENST00000402798 447 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 HMGB3P19-201ENST00000403971 560 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 RN7SKP56-201ENST00000410513 331 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC016397.1-201ENST00000412463 242 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 HSPE1P12-201ENST00000412576 301 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 TPT1P2-201ENST00000413105 503 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 MTCYBP7-201ENST00000419540 1134 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC017083.1-201ENST00000428093 483 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC011742.1-201ENST00000431448 434 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 BMS1P19-201ENST00000433925 393 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC069277.2-201ENST00000454211 432 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.86□□□□□ -1.79
SEMA3DO95025 HMGN1P8-201ENST00000463578 288 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.86□□□□□ -1.79
SEMA3DO95025 HPRT1P2-201ENST00000505250 544 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC109458.1-201ENST00000508858 316 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.86□□□□□ -1.79
SEMA3DO95025 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.86□□□□□ -1.79
SEMA3DO95025 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.86□□□□□ -1.79
SEMA3DO95025 RNU6-347P-201ENST00000516658 105 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 GNRHR2P1-201ENST00000555315 631 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC027281.1-201ENST00000574178 758 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.86□□□□□ -1.79
SEMA3DO95025 AP001542.1-201ENST00000591314 200 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 SNX6P1-201ENST00000601728 1224 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AL049634.3-201ENST00000604968 457 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.86□□□□□ -1.79
SEMA3DO95025 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEMA3DO95025 AL590410.1-201ENST00000617925 333 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEMA3DO95025 RMST_5.1-201ENST00000618704 126 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 AC095038.2-201ENST00000621464 1070 ntBASIC3.86□□□□□ -1.79
SEMA3DO95025 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SEMA3DO95025 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEMA3DO95025 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
SEMA3DO95025 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.86□□□□□ -1.79
SEMA3DO95025 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AL807761.1-201ENST00000417622 171 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AC092832.1-201ENST00000422934 400 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 FAR2P4-202ENST00000425399 584 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 USP9YP7-201ENST00000436723 430 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.85□□□□□ -1.79
SEMA3DO95025 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.85□□□□□ -1.79
SEMA3DO95025 RPS4XP4-201ENST00000443195 763 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.85□□□□□ -1.79
SEMA3DO95025 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.85□□□□□ -1.79
SEMA3DO95025 USP9YP32-201ENST00000452432 430 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AC012170.1-201ENST00000495139 359 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AC138701.1-201ENST00000524329 714 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AL161713.1-201ENST00000555538 145 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AL109741.3-201ENST00000561748 592 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AC023575.1-201ENST00000580510 358 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AC011477.5-201ENST00000586571 259 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 AC005255.1-201ENST00000593748 216 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.85□□□□□ -1.79
SEMA3DO95025 AC007620.3-201ENST00000608131 497 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.85□□□□□ -1.79
SEMA3DO95025 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.85□□□□□ -1.79
SEMA3DO95025 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEMA3DO95025 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEMA3DO95025 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEMA3DO95025 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEMA3DO95025 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SEMA3DO95025 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms