Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.39□□□□□ -1.87
UPK1BO75841 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1BO75841 AC053481.2-202ENST00000582394 1500 ntBASIC3.39□□□□□ -1.87
UPK1BO75841 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1BO75841 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1BO75841 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
UPK1BO75841 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
UPK1BO75841 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1BO75841 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1BO75841 AL118496.1-201ENST00000440201 1812 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AL513302.2-201ENST00000562313 1842 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
UPK1BO75841 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1BO75841 OR5P1P-201ENST00000299512 925 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 RNU1-14P-201ENST00000362759 152 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 SNORD6-201ENST00000365444 73 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1BO75841 RNA5SP36-201ENST00000410197 133 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AL513325.1-201ENST00000417716 1034 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AC244453.4-201ENST00000419150 388 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1BO75841 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1BO75841 AL158071.1-201ENST00000430315 461 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1BO75841 BX679664.1-201ENST00000434429 253 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
UPK1BO75841 RPL31P15-201ENST00000449770 338 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1BO75841 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1BO75841 RN7SL442P-201ENST00000473804 320 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 UBA52P7-201ENST00000486088 380 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1BO75841 AC021146.5-201ENST00000503544 545 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.38□□□□□ -1.87
UPK1BO75841 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1BO75841 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1BO75841 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 OR5H4P-201ENST00000510851 923 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 RPL7L1P4-201ENST00000513004 707 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 RN7SKP70-201ENST00000516655 271 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1BO75841 AC022790.1-201ENST00000522872 204 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1BO75841 AC021006.3-201ENST00000530771 192 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1BO75841 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1BO75841 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1BO75841 AL845331.3-202ENST00000562856 261 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 BGLT3-201ENST00000564523 994 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 MTND4LP24-201ENST00000572277 291 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AC025627.2-201ENST00000576220 160 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 RN7SL690P-201ENST00000582087 240 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 MIR5684-201ENST00000585074 65 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1BO75841 MTCO3P22-201ENST00000603219 784 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1BO75841 AC103710.3-201ENST00000608157 948 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 AC020763.5-201ENST00000623298 430 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1BO75841 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1BO75841 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1BO75841 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1BO75841 MFSD8-236ENST00000641509 4050 ntBASIC3.38□□□□□ -1.87
UPK1BO75841 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1BO75841 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1BO75841 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1BO75841 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1BO75841 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1BO75841 OTUD4P1-201ENST00000237841 3067 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.37□□□□□ -1.87
UPK1BO75841 RNA5SP293-201ENST00000410527 113 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 MTND2P15-201ENST00000418575 892 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 MFSD13B-201ENST00000420133 1290 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 RPL17P36-201ENST00000420302 549 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 IPPKP1-201ENST00000422501 768 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 USP9YP7-201ENST00000436723 430 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 HMGN1P2-201ENST00000445197 310 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 TPTE2P6-202ENST00000445572 1007 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1BO75841 USP9YP32-201ENST00000452432 430 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1BO75841 RN7SL172P-201ENST00000460535 303 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 RPS27P29-201ENST00000463110 252 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.37□□□□□ -1.87
UPK1BO75841 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.37□□□□□ -1.87
UPK1BO75841 FCF1P3-201ENST00000496394 590 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 IGBP1P5-201ENST00000507524 1000 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1BO75841 RN7SKP289-201ENST00000517244 295 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 HMGB1P46-201ENST00000520062 610 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1BO75841 AC105233.3-201ENST00000531125 744 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 AC006518.1-201ENST00000541449 943 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.37□□□□□ -1.87
UPK1BO75841 AL121594.4-201ENST00000556211 1196 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1BO75841 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1BO75841 AC037471.2-201ENST00000564941 598 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms