Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC008011.1-201ENST00000545989 227 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 AC106785.3-201ENST00000564064 847 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.98□□□□□ -1.93
SSSCA1O60232 AC022146.1-201ENST00000595307 847 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 BNIP3P38-201ENST00000601117 544 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.98□□□□□ -1.93
SSSCA1O60232 AL135786.2-201ENST00000608422 615 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 AC211433.2-201ENST00000608433 387 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 AC019193.2-201ENST00000610012 634 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SSSCA1O60232 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.98□□□□□ -1.93
SSSCA1O60232 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.98□□□□□ -1.93
SSSCA1O60232 AF001550.2-201ENST00000636643 217 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSSCA1O60232 CR382285.2-201ENST00000624662 1495 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSSCA1O60232 AP002088.1-201ENST00000382740 395 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC104297.1-201ENST00000393779 870 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.97□□□□□ -1.93
SSSCA1O60232 AL691447.1-201ENST00000419456 387 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.97□□□□□ -1.93
SSSCA1O60232 AC006455.6-201ENST00000426192 893 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 HMGB3P5-201ENST00000428894 612 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSSCA1O60232 AL356276.2-201ENST00000435919 558 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.97□□□□□ -1.93
SSSCA1O60232 AC074367.1-201ENST00000438685 1125 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.97□□□□□ -1.93
SSSCA1O60232 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.97□□□□□ -1.93
SSSCA1O60232 AC010468.1-201ENST00000461022 817 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 RPL7P48-201ENST00000461513 746 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 RPL7L1P8-201ENST00000469911 741 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC007537.2-201ENST00000472093 511 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC087385.1-201ENST00000475062 312 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC091167.1-201ENST00000492017 396 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.97□□□□□ -1.93
SSSCA1O60232 AC025674.1-201ENST00000507074 324 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC110768.1-201ENST00000509222 400 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSSCA1O60232 OR5AN2P-201ENST00000534535 896 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC063949.1-201ENST00000552900 865 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC027281.1-201ENST00000574178 758 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 RN7SL600P-201ENST00000581811 299 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.97□□□□□ -1.93
SSSCA1O60232 AL049634.3-201ENST00000604968 457 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 ARF4P1-201ENST00000605447 541 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 AC100827.5-201ENST00000615883 426 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSSCA1O60232 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.97□□□□□ -1.93
SSSCA1O60232 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.97□□□□□ -1.93
SSSCA1O60232 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.97□□□□□ -1.93
SSSCA1O60232 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SSSCA1O60232 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.97□□□□□ -1.93
SSSCA1O60232 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSSCA1O60232 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.97□□□□□ -1.93
SSSCA1O60232 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSSCA1O60232 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
SSSCA1O60232 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
SSSCA1O60232 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 MIR30E-201ENST00000362104 92 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 RNA5SP42-201ENST00000364278 115 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 RNA5SP130-201ENST00000364431 114 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC092642.1-201ENST00000392417 425 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC016397.1-201ENST00000412463 242 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 AL732292.1-201ENST00000426692 226 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 HMGB3P10-201ENST00000434734 572 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.96□□□□□ -1.94
SSSCA1O60232 SETD6P1-201ENST00000444575 317 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.96□□□□□ -1.94
SSSCA1O60232 AL136097.1-201ENST00000456945 913 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC105137.1-201ENST00000484355 562 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 AC020893.1-201ENST00000502452 580 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.96□□□□□ -1.94
SSSCA1O60232 NDUFB4P9-201ENST00000511646 388 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC109635.6-201ENST00000525487 1113 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 OR7E13P-201ENST00000526052 910 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 OR4C2P-201ENST00000530855 1064 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC2.96□□□□□ -1.94
SSSCA1O60232 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC2.96□□□□□ -1.94
SSSCA1O60232 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC015726.1-201ENST00000602353 681 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 AC083899.3-201ENST00000603413 594 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 AL356218.2-201ENST00000605264 187 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.96□□□□□ -1.94
SSSCA1O60232 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.96□□□□□ -1.94
SSSCA1O60232 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 MIR6719-201ENST00000622428 87 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms