Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 uc_338.12-201ENST00000616344 181 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 MIR6861-201ENST00000618657 64 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXA2O43364 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXA2O43364 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXA2O43364 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXA2O43364 CUBNP3-201ENST00000457461 1784 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 AL442128.2-201ENST00000620246 1824 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 TRIM51GP-201ENST00000534741 1350 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HOXA2O43364 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HOXA2O43364 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HOXA2O43364 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HOXA2O43364 STAG3L4-201ENST00000352103 530 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RNU6-28P-201ENST00000362378 107 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RNA5SP77-201ENST00000365394 120 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXA2O43364 AL451142.1-201ENST00000375867 775 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RNU6-729P-201ENST00000384399 107 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RNU6-225P-201ENST00000384613 103 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 MIR137-201ENST00000385223 102 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RNU2-3P-201ENST00000410144 191 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RNU2-29P-201ENST00000410423 189 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RPL36AP36-201ENST00000418616 301 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RPL7L1P10-201ENST00000427790 463 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AC096644.2-201ENST00000429278 159 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 OR7E116P-201ENST00000448529 957 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXA2O43364 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXA2O43364 AL035090.1-201ENST00000454835 332 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 RPL35AP28-201ENST00000459730 331 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 RPL7AP10-201ENST00000481016 791 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 SUMO2P7-201ENST00000511179 285 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 HSD3BP3-201ENST00000514706 994 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AP005435.4-201ENST00000529514 284 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXA2O43364 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXA2O43364 AL591767.3-201ENST00000554632 525 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AC106785.4-201ENST00000569492 412 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 SNORA70D-201ENST00000578836 135 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXA2O43364 AC073539.2-201ENST00000597113 165 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 AL513327.3-201ENST00000602618 469 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AL670379.11-201ENST00000604059 253 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AL670379.10-201ENST00000604330 253 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AL670379.12-201ENST00000605291 253 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 AL670379.9-201ENST00000605428 253 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 OR6R2P-201ENST00000609216 300 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 MIR1910-201ENST00000636955 80 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HOXA2O43364 AC083806.2-201ENST00000617795 2685 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 AC241584.2-201ENST00000637142 2090 ntBASIC7.16□□□□□ -1.26
HOXA2O43364 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA2O43364 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA2O43364 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.15□□□□□ -1.26
HOXA2O43364 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.15□□□□□ -1.26
HOXA2O43364 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HOXA2O43364 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
HOXA2O43364 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HOXA2O43364 SNORA51.6-201ENST00000384151 125 ntBASIC7.15□□□□□ -1.26
HOXA2O43364 MIR188-201ENST00000385034 86 ntBASIC7.15□□□□□ -1.26
HOXA2O43364 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
HOXA2O43364 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
HOXA2O43364 AL360271.1-201ENST00000395679 510 ntBASIC7.15□□□□□ -1.26
HOXA2O43364 AL023807.1-201ENST00000407932 359 ntBASIC7.15□□□□□ -1.26
HOXA2O43364 RN7SKP235-201ENST00000410662 305 ntBASIC7.15□□□□□ -1.26
HOXA2O43364 RNU6-954P-201ENST00000411355 107 ntBASIC7.15□□□□□ -1.26
HOXA2O43364 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms