Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC005410.1-202ENST00000460347 485 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC011037.1-201ENST00000483964 558 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 RPL7P41-201ENST00000485823 957 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 HMGN2P25-201ENST00000486956 268 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 UBA52P3-201ENST00000491303 382 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 AL671862.1-201ENST00000515851 349 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 AF279873.1-201ENST00000523393 313 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC087373.1-201ENST00000524920 491 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 GSTP1P1-201ENST00000548078 319 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 RN7SL435P-201ENST00000584418 282 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRIM38O00635 DEFB131E-202ENST00000602581 683 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AL392112.1-201ENST00000605115 829 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AC069545.1-201ENST00000605671 358 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC093648.1-201ENST00000623546 606 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC135068.12-201ENST00000637370 931 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM38O00635 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM38O00635 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM38O00635 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM38O00635 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM38O00635 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.09□□□□□ -1.6
TRIM38O00635 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM38O00635 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM38O00635 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRIM38O00635 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM38O00635 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TRIM38O00635 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM38O00635 IRF5P1-201ENST00000504852 2164 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 MTND4P8-201ENST00000514997 1362 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 RNU6-839P-201ENST00000363347 108 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TRIM38O00635 GSTA8P-201ENST00000404253 637 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 Y_RNA.619-201ENST00000410951 90 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 FAR2P2-201ENST00000413041 594 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 KRR1P1-201ENST00000419430 803 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 FAR2P4-202ENST00000425399 584 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 OR2AH1P-201ENST00000425717 928 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AL158073.1-201ENST00000426848 1104 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 USP9YP11-201ENST00000427537 717 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 USP9YP9-201ENST00000429406 715 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM38O00635 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM38O00635 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM38O00635 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM38O00635 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM38O00635 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM38O00635 HMGB1P48-201ENST00000446155 598 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AC007327.1-201ENST00000447461 264 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AC004022.1-201ENST00000447766 1066 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AC009220.1-201ENST00000451614 275 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM38O00635 USP9YP25-201ENST00000457708 443 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 BET1P1-201ENST00000482276 359 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AC126121.1-201ENST00000482313 553 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 VPS26AP1-201ENST00000483197 979 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM38O00635 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM38O00635 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
TRIM38O00635 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM38O00635 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM38O00635 RNA5SP135-201ENST00000517019 125 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM38O00635 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM38O00635 AC090819.1-201ENST00000523800 1111 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 OR4C2P-201ENST00000530855 1064 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM38O00635 SERPINE4P-201ENST00000554978 281 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AC079075.1-201ENST00000559543 878 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM38O00635 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM38O00635 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM38O00635 HULC.1-201ENST00000612720 240 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AC024257.5-201ENST00000612739 531 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AL627230.1-201ENST00000613077 211 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 AL591926.8-201ENST00000616876 211 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AC015914.2-201ENST00000618167 288 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
TRIM38O00635 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms