Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX1O00570 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX1O00570 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX1O00570 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 RNY3P3-201ENST00000363816 102 ntBASIC6.26□□□□□ -1.41
SOX1O00570 RNU6-1322P-201ENST00000364309 107 ntBASIC6.26□□□□□ -1.41
SOX1O00570 RNA5SP479-201ENST00000364858 117 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC068538.1-201ENST00000376856 336 ntBASIC6.26□□□□□ -1.41
SOX1O00570 Y_RNA.431-201ENST00000384086 102 ntBASIC6.26□□□□□ -1.41
SOX1O00570 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.26□□□□□ -1.41
SOX1O00570 MIR1305-201ENST00000408300 86 ntBASIC6.26□□□□□ -1.41
SOX1O00570 MIR320C1-201ENST00000408566 88 ntBASIC6.26□□□□□ -1.41
SOX1O00570 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 NMD3P2-201ENST00000421815 761 ntBASIC6.26□□□□□ -1.41
SOX1O00570 EIF1P3-201ENST00000423841 334 ntBASIC6.26□□□□□ -1.41
SOX1O00570 MTCO2P12-201ENST00000427426 682 ntBASIC6.26□□□□□ -1.41
SOX1O00570 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 TAAR7P-201ENST00000436141 242 ntBASIC6.26□□□□□ -1.41
SOX1O00570 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 CACYBPP1-201ENST00000438592 684 ntBASIC6.26□□□□□ -1.41
SOX1O00570 LSM1P1-201ENST00000438629 273 ntBASIC6.26□□□□□ -1.41
SOX1O00570 RPL23AP16-201ENST00000441715 421 ntBASIC6.26□□□□□ -1.41
SOX1O00570 MTCO1P27-201ENST00000448269 226 ntBASIC6.26□□□□□ -1.41
SOX1O00570 ARPC3P5-201ENST00000448802 534 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 AL450023.1-201ENST00000450868 751 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AL389915.2-201ENST00000454576 441 ntBASIC6.26□□□□□ -1.41
SOX1O00570 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 RNU7-27P-201ENST00000459281 62 ntBASIC6.26□□□□□ -1.41
SOX1O00570 RPL7P42-201ENST00000481005 679 ntBASIC6.26□□□□□ -1.41
SOX1O00570 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 RPL36AP51-201ENST00000487216 318 ntBASIC6.26□□□□□ -1.41
SOX1O00570 FAM172BP-201ENST00000487497 1089 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC096576.1-201ENST00000489014 359 ntBASIC6.26□□□□□ -1.41
SOX1O00570 KLRA1P-201ENST00000503499 986 ntBASIC6.26□□□□□ -1.41
SOX1O00570 SNRPCP2-201ENST00000504370 475 ntBASIC6.26□□□□□ -1.41
SOX1O00570 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.26□□□□□ -1.41
SOX1O00570 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 MTND6P2-201ENST00000512226 524 ntBASIC6.26□□□□□ -1.41
SOX1O00570 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.26□□□□□ -1.41
SOX1O00570 TPM3P3-201ENST00000521343 354 ntBASIC6.26□□□□□ -1.41
SOX1O00570 HIGD1AP6-201ENST00000521833 279 ntBASIC6.26□□□□□ -1.41
SOX1O00570 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.26□□□□□ -1.41
SOX1O00570 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 AC093027.1-201ENST00000546698 429 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC037471.2-201ENST00000564941 598 ntBASIC6.26□□□□□ -1.41
SOX1O00570 MRPS21P7-201ENST00000566937 238 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX1O00570 AC018638.8-201ENST00000588755 281 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AL360085.1-201ENST00000604713 532 ntBASIC6.26□□□□□ -1.41
SOX1O00570 Z98200.1-201ENST00000607298 470 ntBASIC6.26□□□□□ -1.41
SOX1O00570 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC145207.9-201ENST00000623802 325 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC063952.1-203ENST00000634410 658 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.26□□□□□ -1.41
SOX1O00570 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.26□□□□□ -1.41
SOX1O00570 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 AC110597.1-201ENST00000562669 3176 ntBASIC6.26□□□□□ -1.41
SOX1O00570 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
SOX1O00570 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SOX1O00570 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX1O00570 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms