Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ARL2BPP10-201ENST00000446487 531 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC28A1O00337 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC28A1O00337 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC28A1O00337 RN7SL610P-201ENST00000463845 291 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 RN7SL354P-201ENST00000469282 294 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC28A1O00337 MTATP6P22-201ENST00000507369 598 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC28A1O00337 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC28A1O00337 AC090281.1-201ENST00000523019 276 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC28A1O00337 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.13□□□□□ -1.75
SLC28A1O00337 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC28A1O00337 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC28A1O00337 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC28A1O00337 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC28A1O00337 MIR4458-201ENST00000578872 75 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 AC124283.4-201ENST00000581815 456 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 AC068790.7-201ENST00000602347 528 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 AL392112.1-201ENST00000605115 829 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC28A1O00337 AC008785.1-201ENST00000624475 456 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 AP000843.1-201ENST00000624880 701 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC28A1O00337 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
SLC28A1O00337 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC28A1O00337 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC28A1O00337 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SLC28A1O00337 AC046144.1-201ENST00000478559 1853 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC28A1O00337 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
SLC28A1O00337 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC28A1O00337 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC28A1O00337 AC083899.2-201ENST00000423285 1376 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SLC28A1O00337 AL132640.2-201ENST00000559968 1698 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC28A1O00337 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 AC022893.2-201ENST00000564832 3296 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
SLC28A1O00337 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 MIR331-201ENST00000362302 94 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 RNA5SP391-201ENST00000363456 119 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 SNORD74.4-201ENST00000364129 80 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AP002784.2-201ENST00000397300 549 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 RPL23AP48-201ENST00000406913 488 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 MIR1179-201ENST00000408703 91 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC28A1O00337 RPS26P40-201ENST00000435209 294 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC28A1O00337 ELOCP8-201ENST00000439309 332 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 AC092170.1-201ENST00000440211 356 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 ELOCP15-201ENST00000442090 332 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 AL512326.1-201ENST00000443050 721 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC28A1O00337 DNAJC19P8-201ENST00000452887 259 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC28A1O00337 BNIP3P41-201ENST00000503774 571 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC28A1O00337 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC28A1O00337 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AL161713.1-201ENST00000555538 145 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 AP000919.1-202ENST00000581139 1264 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 MIR4480-201ENST00000582492 71 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AC008638.3-201ENST00000603341 463 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 AC012409.3-201ENST00000611343 981 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 AL161616.1-201ENST00000611867 286 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 MIR6780A-201ENST00000615089 68 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 AC092608.3-201ENST00000625017 386 ntBASIC4.12□□□□□ -1.75
SLC28A1O00337 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC28A1O00337 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC28A1O00337 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SLC28A1O00337 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC28A1O00337 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC28A1O00337 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC28A1O00337 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC28A1O00337 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SLC28A1O00337 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms