Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 IGLVVI-25-1-201ENST00000521893 249 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 OR5AP1P-201ENST00000529730 940 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 SETP2-201ENST00000553886 926 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC007599.1-201ENST00000568688 1174 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC008507.1-201ENST00000587506 734 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC011447.4-201ENST00000587562 111 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 OR2BH1P-201ENST00000608850 864 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC096586.2-201ENST00000610260 441 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 MIR6726-201ENST00000613751 61 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC073592.6-201ENST00000624271 415 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC111152.1-202ENST00000635848 339 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 MAPK10-322ENST00000641485 4530 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC092435.3-201ENST00000565538 3654 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL7P26-201ENST00000333817 754 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SKP184-201ENST00000362348 333 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RNA5SP366-201ENST00000365454 123 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RAB5CP1-201ENST00000395972 580 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 ZNF37CP-201ENST00000406795 241 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 OR51B3P-201ENST00000412287 913 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 HSPE1P1-201ENST00000421494 318 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 GLRXP1-201ENST00000423261 334 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 OSTCP5-201ENST00000425293 453 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC006989.1-201ENST00000427212 131 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC104332.2-201ENST00000429959 156 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC068287.1-201ENST00000430283 295 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 OR4C10P-201ENST00000434991 931 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 HMGB1P37-201ENST00000439613 609 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 NUTF2P3-201ENST00000448540 384 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RPS26P41-201ENST00000450370 284 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 SSXP4-201ENST00000451349 245 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL23AP81-201ENST00000455252 467 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL21P104-201ENST00000464143 478 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RPS26P21-201ENST00000475397 348 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 ACTG1P13-201ENST00000486987 1043 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RPS3AP50-201ENST00000487064 803 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 TRBV12-2-201ENST00000489763 344 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SL568P-201ENST00000493069 298 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC106822.1-201ENST00000502647 526 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 MRPS33P2-201ENST00000507850 322 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SKP244-201ENST00000516513 307 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 RNU7-143P-201ENST00000516781 65 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 SEC11B-201ENST00000518383 499 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 SUMO2P20-201ENST00000520803 283 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC245166.1-201ENST00000521012 253 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC025627.2-201ENST00000576220 160 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AL133247.2-201ENST00000603236 482 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC112503.1-201ENST00000608436 391 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 MIR6807-201ENST00000621968 92 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 AC103988.1-201ENST00000566382 2177 ntBASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHKB-CPT1BH3BT56 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 RNA5SP235-201ENST00000365411 114 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 SNORA26.7-201ENST00000391288 122 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL034374.1-201ENST00000406329 351 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms