Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 UQCRBP1-201ENST00000421129 336 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AL353729.1-201ENST00000425044 720 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC083862.1-201ENST00000427378 1242 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 OR4F13P-201ENST00000428478 931 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 ATP5JP1-201ENST00000431631 322 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 GAPDHP19-201ENST00000431768 1005 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 GPR143P-201ENST00000434155 205 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 RPS10P14-201ENST00000440748 502 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 BX842559.2-201ENST00000451418 605 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 TRBV5-2-201ENST00000489095 273 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC026427.2-201ENST00000506228 536 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 RPL7L1P7-201ENST00000509986 724 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 RNA5SP401-201ENST00000515920 127 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 RNU7-30P-201ENST00000516835 62 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AL133399.1-201ENST00000527476 298 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 CYCSP28-201ENST00000534284 321 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC087241.2-201ENST00000535801 324 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC123904.2-201ENST00000548059 300 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AL163952.1-202ENST00000569625 600 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 LARP7P2-201ENST00000575306 125 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 MIR3118-1-201ENST00000581787 76 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC004805.3-201ENST00000603178 310 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC115621.1-201ENST00000604653 858 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 MIR7159-201ENST00000620587 66 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHISA3A0PJX4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 CR392039.4-201ENST00000624968 501 ntBASIC5.4□□□□□ -1.54
SHISA3A0PJX4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 AC092447.10-201ENST00000620607 1652 ntBASIC5.4□□□□□ -1.55
SHISA3A0PJX4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.4□□□□□ -1.55
SHISA3A0PJX4 AC004076.2-201ENST00000620532 3323 ntBASIC5.4□□□□□ -1.55
SHISA3A0PJX4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC005294.1-201ENST00000355509 281 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 Y_RNA.67-201ENST00000362870 100 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 RNU6-853P-201ENST00000364306 107 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 RNA5SP140-201ENST00000364524 92 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 RNU6-343P-201ENST00000364709 104 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 SNORA43.1-201ENST00000364863 140 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 SNORA51.6-201ENST00000384151 125 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 MIR138-2-201ENST00000384916 84 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 MRPL32P1-201ENST00000406301 247 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL023807.1-201ENST00000407932 359 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 GSTM3P2-201ENST00000412746 530 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL139184.1-202ENST00000422303 222 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 RGS17P1-201ENST00000423358 553 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC119618.1-201ENST00000434191 222 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL627308.1-201ENST00000435693 821 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 BNIP3P2-201ENST00000441221 577 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL162739.1-201ENST00000450606 307 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC011005.3-201ENST00000491624 395 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC005912.1-201ENST00000495392 255 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 RPL38P4-201ENST00000502376 214 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms