Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 ADAM5-202ENST00000399789 1942 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 RNU4-44P-201ENST00000363050 141 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 BTBD10P2-201ENST00000404779 676 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC093162.1-201ENST00000419682 124 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC009238.2-201ENST00000431026 355 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 OR6K5P-201ENST00000447050 945 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 MTND2P19-201ENST00000449129 1012 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 RSL24D1P3-201ENST00000449255 495 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 SLC31A1P1-201ENST00000451221 567 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 NCOR1P1-202ENST00000486162 291 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 RPS3AP22-201ENST00000488297 769 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 RPL7P38-201ENST00000488396 739 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 MYL12BP2-201ENST00000503948 512 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC119751.5-201ENST00000514077 770 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC010503.3-201ENST00000594355 540 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC006270.3-201ENST00000605967 1036 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AC245297.2-201ENST00000610119 565 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 MIR6730-201ENST00000622213 67 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 SGO1P2-201ENST00000429458 1589 ntBASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A3BPQ9Y5P4 AL450345.1-202ENST00000605741 3881 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 SNURFL-201ENST00000309296 343 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC073264.1-201ENST00000411508 416 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 TPT1P2-201ENST00000413105 503 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 MFSD13B-201ENST00000420133 1290 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC004448.2-201ENST00000422360 586 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC008072.1-201ENST00000434254 824 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 PSMD10P3-201ENST00000437000 448 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 MTCO3P11-201ENST00000455103 774 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC097484.1-201ENST00000471148 389 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC097173.1-201ENST00000505862 819 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 OR5AK1P-201ENST00000524837 922 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 ELOCP32-201ENST00000548625 324 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AL512347.1-201ENST00000566420 503 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms