Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AL590233.1-201ENST00000430017 456 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL36P19-201ENST00000430744 301 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL34P6-201ENST00000432390 345 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AL590128.1-201ENST00000433407 286 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AL138799.3-201ENST00000438968 350 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 MTND5P22-201ENST00000458380 195 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AL049714.1-201ENST00000466686 347 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL5P22-201ENST00000480199 884 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AC021146.2-201ENST00000504736 556 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 HMGB3P15-201ENST00000507326 574 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AC140063.1-201ENST00000541343 259 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RN7SL426P-201ENST00000579106 295 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 PTCHD3P1-201ENST00000612350 537 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AC000123.2-201ENST00000623124 461 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 SNX18P10-201ENST00000625014 519 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.46□□□□□ -1.37
PCDHGA11Q9Y5H2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 RN7SKP44-201ENST00000363602 316 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 Y_RNA.367-201ENST00000365544 101 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU6-196P-201ENST00000384315 107 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 MIR187-201ENST00000385062 109 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 RNY4P36-201ENST00000391116 96 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU2-39P-201ENST00000410604 198 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AL139135.1-201ENST00000412675 209 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 PPIAP23-201ENST00000420099 497 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC108059.2-201ENST00000434626 151 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 SNRPBP1-201ENST00000443634 282 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC099340.1-201ENST00000475247 599 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 RPL7AP23-201ENST00000482625 776 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC005726.1-201ENST00000494679 427 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC083906.1-201ENST00000509298 406 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 SNRPCP6-201ENST00000528310 210 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC068993.1-201ENST00000546724 589 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC100830.2-201ENST00000581636 240 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC060771.1-201ENST00000582031 164 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC124303.1-201ENST00000605703 360 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 AC016745.2-201ENST00000608834 3443 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDHGA11Q9Y5H2 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 AC092724.1-201ENST00000624623 3397 ntBASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHGA11Q9Y5H2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms