Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC067945.1-201ENST00000342609 618 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AL583835.1-201ENST00000399570 407 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 SNORA11F-201ENST00000408237 128 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RNU4-25P-201ENST00000410569 230 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RAB28P1-201ENST00000411517 641 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RPL21P108-201ENST00000413857 481 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 P2RY10P2-201ENST00000416730 913 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC234782.4-201ENST00000417646 1048 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 COX6CP17-201ENST00000421389 185 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 OR5AW1P-201ENST00000426334 1006 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RPL23AP52-201ENST00000439311 478 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AL357520.1-201ENST00000441557 453 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 PHBP16-201ENST00000446318 950 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RPL7P31-201ENST00000450192 724 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RPL23AP24-201ENST00000458203 385 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RN7SL98P-201ENST00000462271 300 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RPL7P22-201ENST00000466005 733 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC011276.1-201ENST00000469688 323 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 MTCO2P9-201ENST00000503214 694 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 STMN1P2-201ENST00000508435 439 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC093840.1-201ENST00000511599 336 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC008694.2-201ENST00000517591 306 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC010476.1-201ENST00000519111 851 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC113192.3-201ENST00000529152 742 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AL354984.3-201ENST00000604803 325 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC017076.1-201ENST00000607613 578 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC023509.5-201ENST00000617434 807 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 FRG1HP-204ENST00000617940 757 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 uc_338.13-201ENST00000618243 179 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC007546.1-201ENST00000619452 559 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 SEC63P2-201ENST00000503863 1939 ntBASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4BQ9Y4P1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC091046.3-201ENST00000631455 1574 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 RPL32P3-201ENST00000359025 275 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 RNA5SP509-201ENST00000364577 119 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 SNORD66.1-201ENST00000391230 76 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AL606495.1-201ENST00000422100 813 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 PDSS1P1-201ENST00000422953 1114 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 CHIAP3-201ENST00000423668 1133 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 MTCO2P1-201ENST00000424648 477 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AL138785.1-201ENST00000425821 331 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 SKP1P3-201ENST00000429280 487 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC011998.1-201ENST00000433403 117 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC073143.1-201ENST00000436316 395 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 TPT1P12-201ENST00000448968 492 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 RPL7P55-201ENST00000450522 746 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 FGF7P3-201ENST00000454645 303 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC133473.1-201ENST00000455173 299 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 RPS23P7-201ENST00000466210 444 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC026979.1-201ENST00000492525 396 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 RN7SL810P-201ENST00000493031 276 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 RPL30P11-201ENST00000495304 339 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 PPM1AP1-201ENST00000502740 1135 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 IGLV3-26-201ENST00000520756 302 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC090751.1-201ENST00000566966 267 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms