Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AL512782.1-201ENST00000603093 364 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC115621.1-201ENST00000604653 858 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AL391261.4-201ENST00000616012 481 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 MIR6853-201ENST00000619642 74 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 U7.8-201ENST00000619968 63 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 AC138393.1-206ENST00000540997 1886 ntBASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KCNIP3Q9Y2W7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 RNA5SP175-201ENST00000364275 119 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 MIR3065-201ENST00000390137 79 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 RNU6-796P-201ENST00000391086 107 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 U3.25-201ENST00000391209 220 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 SNORA3C-201ENST00000408792 125 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC005154.2-201ENST00000438110 379 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AL353718.1-201ENST00000451028 517 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 RAD23BP3-201ENST00000454157 1152 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC018635.1-201ENST00000468292 1030 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 RPL7P51-201ENST00000490532 749 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC133963.2-201ENST00000513686 578 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 ATP5LP3-201ENST00000514223 304 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 RN7SKP283-201ENST00000517197 270 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 HAUS8P1-201ENST00000549005 542 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC069366.1-201ENST00000583159 838 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AL671309.1-201ENST00000603750 544 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AP003117.2-201ENST00000606010 545 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 STMN1P1-201ENST00000617809 440 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 MIR6861-201ENST00000618657 64 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 AL136964.1-201ENST00000622038 2990 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 FP325313.1-201ENST00000638228 703 ntBASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCNIP3Q9Y2W7 INTS6P1-201ENST00000504674 2530 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC119744.1-201ENST00000454746 1715 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 MTCO1P18-201ENST00000455518 1419 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 DCAF13P3-201ENST00000561147 1334 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RN7SKP269-201ENST00000365545 319 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RNU6-1005P-201ENST00000384519 107 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RNA5SP113-201ENST00000410486 84 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RPS12P23-201ENST00000419579 400 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC023141.6-201ENST00000429418 337 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RPS26P40-201ENST00000435209 294 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 TPTE2P3-201ENST00000441562 1189 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RNFT1P2-201ENST00000443064 757 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 SETP20-201ENST00000457046 852 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RPL7P22-201ENST00000466005 733 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RPL35AP15-201ENST00000468042 339 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms