Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 HMGN2P36-201ENST00000529541 409 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC005668.1-201ENST00000571142 476 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC124312.5-201ENST00000604451 268 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RPSAP73-201ENST00000614820 330 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RN7SL544P-201ENST00000617232 284 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RN7SL763P-201ENST00000620922 284 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC024940.5-201ENST00000622889 474 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC145207.9-201ENST00000623802 325 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AL139384.2-201ENST00000613809 3590 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AC016583.1-201ENST00000624221 2431 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 CKAP2P1-201ENST00000555477 2049 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 MTCO1P7-201ENST00000419523 1542 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 SNRPEP3-201ENST00000338402 276 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 RNU6-289P-201ENST00000364093 107 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 RNA5SP394-201ENST00000364216 119 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 RNU6-115P-201ENST00000364310 107 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 HMGB1P20-201ENST00000402555 677 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 RAB28P1-201ENST00000411517 641 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AC127391.1-201ENST00000411737 98 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 RPEP2-201ENST00000432149 701 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 MRPS21P3-201ENST00000436696 262 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 MTCO1P27-201ENST00000448269 226 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 FTH1P2-201ENST00000466086 412 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AC109481.1-201ENST00000509173 282 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 RNU6-277P-201ENST00000516272 106 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 RNA5SP92-201ENST00000516437 110 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 RN7SKP116-201ENST00000516902 319 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 MIR4301-201ENST00000577203 66 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 MIR6820-201ENST00000611508 62 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AL133173.2-201ENST00000614270 90 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 AC119674.1-204ENST00000641348 1343 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 OR11H5P-202ENST00000641612 1325 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 SMG1P7-201ENST00000565246 2704 ntBASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.41□□□□□ -1.22
ZC3H4Q9UPT8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 ZNF658B-201ENST00000602828 3408 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 LINC00622-201ENST00000562811 1570 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 Y_RNA.144-201ENST00000363521 113 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 Y_RNA.159-201ENST00000363674 87 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 RN7SKP128-201ENST00000364270 303 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 RPL7P58-201ENST00000402913 758 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 RNU6-373P-201ENST00000411247 98 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 RBMY2KP-201ENST00000418221 992 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC023347.2-201ENST00000433994 462 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 RPS27AP15-201ENST00000447672 466 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 TRGVB-201ENST00000453257 471 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC005532.2-201ENST00000467154 373 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC110792.2-201ENST00000510278 224 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms