Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 HMGN1P9-201ENST00000515212 298 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 RN7SKP99-201ENST00000517028 307 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AC090312.1-201ENST00000580637 348 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AL136984.1-201ENST00000607611 1893 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AP001521.1-201ENST00000609150 300 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC009120.2-204ENST00000621548 2032 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 USP9YP4-201ENST00000424401 1745 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 MIR454-201ENST00000390180 115 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AL591848.1-201ENST00000413092 322 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AL138787.1-202ENST00000437804 898 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AL031681.1-201ENST00000443304 400 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 RPS3AP41-201ENST00000462701 778 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 RN7SL612P-201ENST00000497704 295 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC022493.2-201ENST00000506122 481 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC009901.1-201ENST00000506703 541 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC116337.1-201ENST00000509680 687 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 RNA5SP337-201ENST00000517007 109 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 IGHV3-57-201ENST00000520143 280 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 TRIM51DP-201ENST00000529746 596 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 DLEU2_5.1-201ENST00000615567 84 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 MIR6503-201ENST00000622884 86 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 MAPK10-344ENST00000641718 3746 ntBASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM35Q9UPQ4 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 RBPJP6-201ENST00000411556 1431 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 Y_RNA.26-201ENST00000362539 101 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 Y_RNA.64-201ENST00000362845 102 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 EIF4E2P1-201ENST00000393781 255 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 RPL7P60-201ENST00000397636 735 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 RN7SKP146-201ENST00000410242 334 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 RN7SKP188-201ENST00000410789 317 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 BX323014.1-201ENST00000412876 237 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AL713922.1-201ENST00000416477 747 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 RPS15AP12-201ENST00000419498 388 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 ELOCP20-201ENST00000422460 345 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 SNAP23P1-201ENST00000433229 246 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AC103987.1-201ENST00000473394 348 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AC022447.4-201ENST00000504053 364 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AC111193.1-201ENST00000504097 155 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 IL7-206ENST00000520269 456 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AP001485.1-201ENST00000604799 199 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AL391813.2-201ENST00000609113 322 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 DUSP12P1-201ENST00000612874 516 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 AC091925.2-201ENST00000625059 256 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms