Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 OR6C7P-201ENST00000547875 934 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 BGLT3-201ENST00000564523 994 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 MRPS21P7-201ENST00000566937 238 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 MIR3936-201ENST00000584304 110 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 BNIP3P26-201ENST00000600827 554 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AC103881.1-201ENST00000603476 538 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 SUMO2P15-201ENST00000604285 278 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AC092354.1-201ENST00000606057 376 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AC090970.3-201ENST00000612566 866 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AC090517.2-201ENST00000614966 680 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AC116618.1-201ENST00000634617 774 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 AC127502.3-201ENST00000636170 1206 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 CASC19-206ENST00000641028 1430 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 MTND4P23-201ENST00000447723 1363 ntBASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PACSIN3Q9UKS6 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RNA5SP319-201ENST00000362768 119 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RN7SKP6-201ENST00000364795 319 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RN7SKP153-201ENST00000365026 316 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RNA5SP223-201ENST00000365174 120 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 UBBP2-201ENST00000376781 231 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RNU6-549P-201ENST00000384433 107 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RNU6-253P-201ENST00000384730 105 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 MIR551A-201ENST00000385042 96 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 U3.32-201ENST00000408116 212 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC007738.1-201ENST00000413892 348 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RPL7P30-201ENST00000420888 709 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AL109913.1-201ENST00000421173 514 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AL034379.1-201ENST00000423216 253 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 GTF2IP23-201ENST00000423746 351 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 OR5AW1P-201ENST00000426334 1006 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 CNOT7P1-201ENST00000429006 852 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AL138787.1-202ENST00000437804 898 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC091862.1-201ENST00000438016 1100 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RPL7AP61-201ENST00000443410 636 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 NANOGNBP1-201ENST00000448444 480 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RPL5P13-201ENST00000462840 709 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC100832.1-201ENST00000471945 383 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RN7SL184P-201ENST00000488308 297 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC022133.1-201ENST00000490961 571 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 OR4G11P-201ENST00000492842 939 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 ARL2BPP4-201ENST00000506854 471 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC098799.2-201ENST00000509466 868 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 RN7SKP244-201ENST00000516513 307 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 IGLV2-28-201ENST00000520681 304 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 SMARCE1P4-201ENST00000523647 241 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC009063.1-201ENST00000563342 702 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 SNORA59B-202ENST00000578183 701 ntBASIC5.02□□□□□ -1.61
PACSIN3Q9UKS6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms