Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 AC034268.2-201ENST00000571784 482 ntBASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 AC015917.1-201ENST00000579654 510 ntBASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 BCRP9-201ENST00000605312 388 ntBASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 RNU6-87P-201ENST00000607561 108 ntBASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 AC002550.2-201ENST00000621246 394 ntBASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 AC025470.1-201ENST00000510053 2032 ntBASIC6.37□□□□□ -1.39
SALL4Q9UJQ4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 RNU6-777P-201ENST00000364265 104 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 SNORD81.2-201ENST00000365153 76 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 RNU1-149P-201ENST00000390870 161 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL445669.1-201ENST00000426743 755 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 SEPT14P3-201ENST00000439401 183 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL732372.2-207ENST00000445840 183 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 RPS23P9-201ENST00000448848 438 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 SEPT14P2-201ENST00000453405 183 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 Z83838.1-202ENST00000456225 839 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 RNU6-420P-201ENST00000458780 107 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC114967.1-201ENST00000504890 259 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 MTND6P2-201ENST00000512226 524 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 SEPT14P4-201ENST00000513445 186 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 RNU6-1003P-201ENST00000517099 105 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC136777.2-201ENST00000522979 358 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AF279873.1-201ENST00000523393 313 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 FO082796.1-201ENST00000523795 183 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC022690.1-201ENST00000526681 550 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 BRD9P1-201ENST00000529855 560 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 OR4A12P-201ENST00000530847 918 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC078814.3-201ENST00000553036 491 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 HMGN2P47-201ENST00000559378 272 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC018638.8-201ENST00000588755 281 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 COX6CP4-201ENST00000605798 228 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL132765.2-201ENST00000610812 351 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC096861.1-201ENST00000616652 240 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC068722.2-201ENST00000618734 544 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC241377.1-201ENST00000619797 406 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 YWHAEP7-203ENST00000622054 312 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC021106.3-201ENST00000623925 531 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC140134.1-201ENST00000511830 3544 ntBASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.36□□□□□ -1.39
SALL4Q9UJQ4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms