Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 C4BPAP2-201ENST00000428434 478 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AL591719.1-201ENST00000444669 744 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC116533.1-201ENST00000459748 321 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 MTCO2P6-201ENST00000463134 685 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 RPS4XP6-201ENST00000477670 797 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 METTL15P1-201ENST00000481421 1045 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC026414.1-201ENST00000504046 698 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 RNA5SP464-201ENST00000516251 108 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC018442.3-201ENST00000523025 183 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 DUXAP5-201ENST00000529668 529 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 RPL21P7-201ENST00000557463 483 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AL135786.2-201ENST00000608422 615 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC068057.2-201ENST00000624047 895 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 AC021242.1-201ENST00000507315 2035 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 VPS35P1-201ENST00000563400 1518 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX4Q9UIU6 NOL8P1-201ENST00000508336 3529 ntBASIC4.66□□□□□ -1.66
SIX4Q9UIU6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SIX4Q9UIU6 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.65□□□□□ -1.66
SIX4Q9UIU6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SIX4Q9UIU6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SIX4Q9UIU6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.65□□□□□ -1.66
SIX4Q9UIU6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SIX4Q9UIU6 MFSD8-242ENST00000641690 4199 ntBASIC4.65□□□□□ -1.66
SIX4Q9UIU6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 RNA5SP366-201ENST00000365454 123 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 U6.112-201ENST00000384129 70 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 LINC01347-201ENST00000417964 355 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 MTND2P16-201ENST00000419987 799 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC234779.1-201ENST00000425910 285 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 RPL7P22-201ENST00000466005 733 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 RPS23P7-201ENST00000466210 444 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 RN7SL860P-201ENST00000473738 223 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 RN7SL817P-201ENST00000480777 288 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC092593.2-201ENST00000513866 913 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 RNU6-311P-201ENST00000516224 102 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AL352979.3-201ENST00000553515 247 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 SLC25A36P1-201ENST00000590111 465 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 VN1R87P-201ENST00000596706 487 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AP002967.1-201ENST00000624203 539 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC019226.2-201ENST00000625973 424 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 OR52H1-202ENST00000641796 1061 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AC104260.2-201ENST00000623551 3497 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 SCN1A-220ENST00000641603 12506 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 AP000542.2-201ENST00000623199 6179 ntBASIC4.65□□□□□ -1.67
SIX4Q9UIU6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SIX4Q9UIU6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 RN7SKP224-201ENST00000364140 325 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 RNA5SP175-201ENST00000364275 119 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 RNA5SP22-201ENST00000365393 109 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 SNORA62-201ENST00000365493 153 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 SNORD66.1-201ENST00000391230 76 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC092638.1-201ENST00000411966 1275 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC005005.2-201ENST00000420779 380 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC004448.2-201ENST00000422360 586 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms