Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 PFN1P11-201ENST00000445829 389 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 HMGB3P22-202ENST00000451823 572 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 RPS29P15-201ENST00000458329 171 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 RN7SL39P-201ENST00000462264 297 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AL135752.1-201ENST00000479477 471 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 ALDH7A1P3-201ENST00000492517 345 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC055733.3-201ENST00000505214 523 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC116562.3-201ENST00000506136 177 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC093870.1-201ENST00000506837 213 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC098591.2-201ENST00000510152 315 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 PRMT5P1-201ENST00000514351 598 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 RN7SKP99-201ENST00000517028 307 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 CYCSP22-201ENST00000517555 339 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC068587.5-201ENST00000528506 175 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AP005435.4-201ENST00000529514 284 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AP000889.2-201ENST00000532684 490 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC110588.1-201ENST00000559699 137 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 MIR4503-201ENST00000582187 83 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 MIR5690-201ENST00000583739 73 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 MIR4424-201ENST00000585257 86 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AL121992.2-201ENST00000606262 256 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 RFPL4AP6-201ENST00000616792 846 ntBASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LIMD1Q9UGP4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 PPIAP24-201ENST00000328558 471 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 RNA5SP321-201ENST00000362722 111 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 RNA5SP172-201ENST00000365061 118 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 CISD1P1-201ENST00000393907 327 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 SNORA77.2-201ENST00000408571 112 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 Y_RNA.605-201ENST00000410577 105 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AC009310.1-201ENST00000414414 451 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AL139396.1-201ENST00000421137 167 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 DEFA11P-201ENST00000446470 261 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 RPL35AP28-201ENST00000459730 331 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AC091849.1-201ENST00000509920 121 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 RNU6-123P-201ENST00000516163 102 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 RN7SKP98-201ENST00000517070 156 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AP001804.3-201ENST00000525146 880 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 OR5B10P-201ENST00000532869 642 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 MIR4775-201ENST00000581168 75 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AL138895.2-201ENST00000603019 178 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 AC099494.2-201ENST00000623371 978 ntBASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIMD1Q9UGP4 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LIMD1Q9UGP4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LIMD1Q9UGP4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LIMD1Q9UGP4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
LIMD1Q9UGP4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LIMD1Q9UGP4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
LIMD1Q9UGP4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.03□□□□□ -1.28
LIMD1Q9UGP4 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms