Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 MTCO3P2-201ENST00000457365 171 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL445433.1-201ENST00000457507 257 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC023141.9-201ENST00000458734 412 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 NIFKP7-201ENST00000503365 834 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC008837.2-201ENST00000513076 418 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 BX510359.5-201ENST00000515651 304 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC011445.2-201ENST00000599274 173 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC091057.2-201ENST00000602594 792 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC008814.1-201ENST00000603797 406 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL589674.2-201ENST00000604304 337 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC010680.4-201ENST00000605334 543 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC091946.2-201ENST00000606105 291 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC105429.2-201ENST00000610567 517 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 MIR8080-201ENST00000622224 89 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AP000676.4-201ENST00000624659 623 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 BMS1P21-201ENST00000634565 365 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC092435.4-201ENST00000623012 4159 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC090229.1-201ENST00000590983 1609 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 MTND4P26-201ENST00000415971 1359 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 OR4A15-201ENST00000314706 1035 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RNU1-85P-201ENST00000364127 164 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RNA5SP90-201ENST00000364801 99 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 SNORA16A-201ENST00000384342 137 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 ENSAP1-201ENST00000392855 326 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RNA5SP80-201ENST00000410475 111 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 NRBF2P2-201ENST00000413087 861 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AL133325.1-201ENST00000421090 382 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RPS12P5-201ENST00000423449 371 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 SDCBPP2-201ENST00000424643 885 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 COX7BP2-201ENST00000437976 242 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AL357520.1-201ENST00000441557 453 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 TPTE2P3-201ENST00000441562 1189 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RPL23AP16-201ENST00000441715 421 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RPL23AP76-201ENST00000441860 458 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AC087385.1-201ENST00000475062 312 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RPL7P39-201ENST00000481157 744 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RN7SL441P-201ENST00000492388 296 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 WBP1LP4-201ENST00000505043 344 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AC034244.1-201ENST00000507687 207 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AC079395.1-201ENST00000510981 262 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 GTF2F2P1-201ENST00000511083 675 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RNU5A-4P-201ENST00000516588 111 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 C1GALT1P3-201ENST00000522049 819 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 OR5AZ1P-201ENST00000527448 943 ntBASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB16Q9NRJ7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms