Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC091304.5-201ENST00000568969 158 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC008521.1-201ENST00000587471 187 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC022432.1-201ENST00000595739 310 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 CARSP1-201ENST00000603171 889 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AC012175.1-201ENST00000603755 531 ntBASIC8.56□□□□□ -1.04
RTN4Q9NQC3 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RTN4Q9NQC3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 DDX18P3-201ENST00000404856 2007 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 SNORA71D-201ENST00000363484 134 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 Y_RNA.212-201ENST00000364177 102 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RNA5SP512-201ENST00000364550 120 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 Y_RNA.259-201ENST00000364619 101 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 SMIM11P1-201ENST00000369586 178 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 SNORD3H-201ENST00000384486 214 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RNA5SP23-201ENST00000391006 105 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RPL7L1P10-201ENST00000427790 463 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 GTF2IP13-201ENST00000438487 386 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RNU6-953P-201ENST00000459154 107 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RN7SL325P-201ENST00000460434 283 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RNU6-677P-201ENST00000516914 101 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 CD63-206ENST00000548160 648 ntTSL 2 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 OR4H12P-201ENST00000556269 907 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AL118558.2-201ENST00000556294 238 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RN7SL473P-201ENST00000580341 299 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AL513327.3-201ENST00000602618 469 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AL365204.3-201ENST00000612448 685 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 RFPL4AP6-201ENST00000616792 846 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AL136967.1-201ENST00000625120 441 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 AC134503.1-201ENST00000633048 54 ntBASIC8.55□□□□□ -1.04
RTN4Q9NQC3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8.55□□□□□ -1.04
RTN4Q9NQC3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC100757.1-201ENST00000616872 1835 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 TATDN2P3-201ENST00000452855 3665 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC106800.1-201ENST00000501221 1362 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RN7SKP72-201ENST00000362327 292 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RN7SKP207-201ENST00000411204 303 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RPL7AP73-201ENST00000413490 353 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 PPP1R11P2-201ENST00000423543 382 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AL591704.1-201ENST00000432574 275 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 SCARNA18-201ENST00000459004 134 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RNU7-66P-201ENST00000459469 62 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RNU6-840P-201ENST00000517275 65 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 MYL12AP1-201ENST00000518490 515 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms