Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AP005435.3-201ENST00000531260 3198 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CHD8Q9HCK8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CHD8Q9HCK8 AC019072.1-201ENST00000604535 1551 ntBASIC3.59□□□□□ -1.84
CHD8Q9HCK8 ZNF807-201ENST00000328088 1707 ntBASIC3.59□□□□□ -1.84
CHD8Q9HCK8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CHD8Q9HCK8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC3.59□□□□□ -1.84
CHD8Q9HCK8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CHD8Q9HCK8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CHD8Q9HCK8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.59□□□□□ -1.84
CHD8Q9HCK8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CHD8Q9HCK8 RNU4-35P-201ENST00000362588 141 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 RPS15AP29-201ENST00000445539 400 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AC021660.1-201ENST00000465006 554 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 RNU2-27P-201ENST00000516185 142 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AP000916.1-201ENST00000533869 835 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AL360085.1-201ENST00000604713 532 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AC097504.1-201ENST00000515103 2415 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 SNORD9-201ENST00000362566 104 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 RN7SKP167-201ENST00000411047 285 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 GNG5P5-201ENST00000420444 220 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 OR2A20P-203ENST00000498397 1268 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 RNU6-991P-201ENST00000516168 107 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AC093732.2-201ENST00000607950 274 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 AL365440.1-201ENST00000436135 2167 ntBASIC3.58□□□□□ -1.84
CHD8Q9HCK8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHD8Q9HCK8 RNA5SP235-201ENST00000365411 114 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 BMS1P3-201ENST00000372011 932 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 Z97055.1-201ENST00000419730 712 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RNA5SP164-201ENST00000516533 110 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 HSPA8P4-201ENST00000511877 1920 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AF228730.2-201ENST00000438784 848 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RN7SKP67-201ENST00000515905 235 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 SNORA70.17-201ENST00000516449 133 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AC011611.1-201ENST00000552179 197 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 MIR4425-201ENST00000580572 84 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AC005520.3-201ENST00000602874 370 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AC138393.1-206ENST00000540997 1886 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RNA5SP50-201ENST00000363731 107 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RNU1-44P-201ENST00000384453 163 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RAP1BP1-201ENST00000412709 553 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AL591419.1-201ENST00000427423 339 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RPL7P12-201ENST00000446719 750 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RPS17P11-201ENST00000474297 293 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 TRBV12-1-201ENST00000479785 344 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RNU1-41P-201ENST00000516161 162 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 RNU1-48P-201ENST00000516400 162 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AC103843.2-201ENST00000530523 682 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.57□□□□□ -1.84
CHD8Q9HCK8 NRBF2P5-201ENST00000603087 788 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AL110115.1-201ENST00000614396 364 ntBASIC3.57□□□□□ -1.84
CHD8Q9HCK8 AL136360.1-201ENST00000503377 1900 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AL669831.5-218ENST00000591702 1873 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 MIR5186-201ENST00000577504 120 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 IGHV3-29-201ENST00000604817 344 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AL162274.2-201ENST00000614406 332 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms