Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 RPL29P14-201ENST00000495837 428 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 RPL31P61-201ENST00000496160 376 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 SNORA48.9-201ENST00000516419 162 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 HMGB1P46-201ENST00000520062 610 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 MTCO3P22-201ENST00000603219 784 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AC008638.3-201ENST00000603341 463 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AC010608.2-201ENST00000624830 470 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AL773545.4-201ENST00000637262 310 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AL513478.4-201ENST00000641636 310 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 MAPK10-253ENST00000641010 4072 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC004975.1-201ENST00000428733 208 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC011742.1-201ENST00000431448 434 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 BX119904.1-201ENST00000432026 348 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 RPL38P1-201ENST00000460914 211 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC110743.1-201ENST00000584870 478 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 ARF4P1-201ENST00000605447 541 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC090525.3-201ENST00000605601 189 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC110792.4-201ENST00000609843 298 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 MIR7973-1-201ENST00000614683 76 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AC123768.4-201ENST00000616244 701 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AL731566.2-201ENST00000618971 317 ntBASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCSER1Q9C0I3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 OR11H4-201ENST00000315409 1082 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 TPT1P2-201ENST00000413105 503 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 YY1P1-201ENST00000427625 668 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AL356276.2-201ENST00000435919 558 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 TPTE2P3-201ENST00000441562 1189 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AC010683.1-201ENST00000473673 378 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AC093267.1-201ENST00000489176 961 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 VWA8P1-201ENST00000510889 176 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 HNRNPKP5-201ENST00000515300 253 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 RN7SKP21-201ENST00000516503 220 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 MIR548Y-201ENST00000582739 110 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 OR1AB1P-201ENST00000585564 761 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AL139395.1-201ENST00000603662 160 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms