Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC062016.2-201ENST00000420950 676 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 OR7E125P-201ENST00000443450 846 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 HMGN1P36-201ENST00000446623 298 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 DPPA3P1-201ENST00000448050 469 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AP006222.1-205ENST00000450734 457 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 CBX1P2-201ENST00000453841 458 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 RN7SL273P-201ENST00000481561 299 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 MTCYBP18-201ENST00000501056 747 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC098799.3-201ENST00000506095 438 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 DUTP7-201ENST00000507982 486 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC074255.1-201ENST00000511259 501 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 RNU6-875P-201ENST00000516488 106 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC112191.2-201ENST00000522428 333 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC091078.2-201ENST00000557145 559 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC138915.2-201ENST00000569776 97 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 MIR3913-1-201ENST00000577744 102 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC025449.1-201ENST00000603896 529 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC005034.5-201ENST00000604219 466 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC007038.2-201ENST00000608095 740 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 MIR6768-201ENST00000610734 72 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 MIR6793-201ENST00000612376 63 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC234782.5-201ENST00000617723 324 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 CRYM-AS1-204ENST00000637983 556 ntBASIC5.9□□□□□ -1.46
FOXP3Q9BZS1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
FOXP3Q9BZS1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
FOXP3Q9BZS1 MTND4P16-201ENST00000466108 1367 ntBASIC5.9□□□□□ -1.47
FOXP3Q9BZS1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
FOXP3Q9BZS1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
FOXP3Q9BZS1 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AL031985.3-201ENST00000565390 2449 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC017104.4-201ENST00000636283 1592 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 OR4F13P-202ENST00000560066 2054 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 Y_RNA.38-201ENST00000362617 102 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 RN7SKP292-201ENST00000365522 317 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 RNU6-723P-201ENST00000383973 107 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 MT-TL1-201ENST00000386347 75 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 MIR1203-201ENST00000408812 85 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 RPS27AP14-201ENST00000422868 454 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 VDAC1P6-201ENST00000430062 855 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC099521.1-201ENST00000482557 334 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 ATP5LP5-201ENST00000483050 299 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC091951.2-201ENST00000500762 203 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC108078.1-201ENST00000508073 725 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 HMGB1P23-201ENST00000518743 568 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC090616.5-202ENST00000582111 297 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 MIR7853-201ENST00000584820 132 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC078795.3-201ENST00000602913 472 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 DUXAP4-201ENST00000603046 613 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AL161729.4-201ENST00000604650 476 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC087045.1-201ENST00000605856 382 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AL136131.3-201ENST00000607600 188 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 AC131971.1-201ENST00000332881 1482 ntBASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FOXP3Q9BZS1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms