Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 MRPS35P3-201ENST00000603189 709 ntBASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 BDP1P-201ENST00000582658 1990 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 IPO8P1-201ENST00000455509 3109 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AL589994.1-201ENST00000404962 340 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC108032.1-201ENST00000416706 207 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC115285.1-201ENST00000424879 736 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 YME1L1P1-201ENST00000429435 297 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 RPL37P1-201ENST00000432310 284 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC083863.1-201ENST00000438811 231 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 HMGB1P37-201ENST00000439613 609 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AL356535.1-201ENST00000440335 398 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AL162151.2-201ENST00000448875 158 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 MTND2P25-201ENST00000449028 610 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 OR52Y1P-201ENST00000452418 828 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 RPL7P15-201ENST00000461190 712 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC096586.2-201ENST00000610260 441 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 MIR6875-201ENST00000617506 72 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC091953.5-201ENST00000622919 233 ntBASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPF3BQ9BZI7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 RPL5P19-201ENST00000404228 893 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 RNU4-6P-201ENST00000410804 122 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 RPL7AP73-201ENST00000413490 353 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC018644.1-201ENST00000429934 551 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 HIGD1AP4-201ENST00000430194 280 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 RPS3AP12-201ENST00000443616 753 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 APOOP2-201ENST00000461561 539 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 RPL23AP71-201ENST00000470966 469 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 RPL7P49-201ENST00000471402 708 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC010342.1-201ENST00000514047 877 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC091167.4-201ENST00000605079 184 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AP003392.5-201ENST00000607857 415 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC069200.1-201ENST00000609511 323 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC078899.5-201ENST00000612475 178 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC099669.2-201ENST00000616549 437 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 AC073530.2-201ENST00000623987 261 ntBASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPF3BQ9BZI7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AC032011.1-201ENST00000611703 1549 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 HSPA8P17-201ENST00000427029 1382 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 ENSAP1-201ENST00000392855 326 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AL356095.1-201ENST00000417217 199 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AF228730.2-201ENST00000438784 848 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 YWHAQP9-201ENST00000445891 512 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms