Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 MTND2P2-201ENST00000434633 945 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 Z74696.2-201ENST00000436514 498 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC044797.1-201ENST00000445744 679 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 CLIC4P1-201ENST00000453177 535 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC037198.2-201ENST00000478845 733 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 MTND3P6-201ENST00000485242 339 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AL132838.2-201ENST00000492041 314 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 RNU6-362P-201ENST00000516736 90 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 RNA5SP143-201ENST00000516936 115 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC107016.1-201ENST00000550463 337 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC084757.1-201ENST00000559987 490 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC123786.2-201ENST00000603459 275 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC004241.3-201ENST00000611728 517 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AL118556.2-201ENST00000614375 824 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 CFTRP2-201ENST00000634304 199 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 OR5BE1P-202ENST00000641168 1176 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AP001486.2-201ENST00000561652 5113 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 SNORA60-201ENST00000362396 134 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 RPS26P8-201ENST00000393490 348 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 SOD2P1-201ENST00000396543 562 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 RPL21P109-201ENST00000422213 475 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 RPL23AP38-201ENST00000423801 469 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC096638.2-201ENST00000434965 711 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 RANP8-201ENST00000444720 713 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC114755.5-201ENST00000447760 831 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AL645939.1-201ENST00000453429 797 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AL133477.1-201ENST00000457472 514 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 RN7SL93P-201ENST00000463035 293 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AP001960.1-201ENST00000506494 658 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC010342.1-201ENST00000514047 877 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 MTCO1P35-201ENST00000515270 228 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 RNA5SP179-201ENST00000517284 121 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 IGHV3-32-201ENST00000519182 355 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC009303.3-201ENST00000591103 736 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC116447.1-201ENST00000613153 453 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 AC107905.1-201ENST00000616204 426 ntBASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
RSPO3Q9BXY4 LINC02471-203ENST00000641941 4752 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 RLIMP1-201ENST00000339626 1680 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms