Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 MFSD8-218ENST00000641186 4448 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 Y_RNA.180-201ENST00000363867 113 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 SNORA2C-201ENST00000408564 137 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 RNU6-55P-201ENST00000411092 107 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 RNU6-387P-201ENST00000411331 105 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 RPL7P37-201ENST00000425095 738 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 AC105052.2-201ENST00000434317 794 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 AC104698.1-201ENST00000435671 276 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 AL121871.1-201ENST00000443413 436 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 AL136126.1-201ENST00000473603 402 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 FO393415.2-201ENST00000480085 343 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 CEACAMP3-202ENST00000483806 638 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 DEFB109F-201ENST00000491870 277 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 BX005040.2-201ENST00000620504 370 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.63□□□□□ -1.35
USB1Q9BQ65 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
USB1Q9BQ65 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USB1Q9BQ65 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AL161891.1-201ENST00000621575 4636 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC010401.2-201ENST00000575137 4934 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AL592148.3-201ENST00000608771 2646 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 RNU6-774P-201ENST00000363238 107 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 RNU6-770P-201ENST00000363929 105 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 SNORA51.7-201ENST00000384171 134 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 Y_RNA.478-201ENST00000384358 107 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 RNU6-1093P-201ENST00000391194 107 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 SOD1P1-201ENST00000407803 440 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC234781.4-201ENST00000419384 244 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 USP9YP30-201ENST00000430729 455 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 LIN28AP2-201ENST00000445283 458 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC005008.1-201ENST00000456151 612 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 PRELID3BP1-201ENST00000457142 540 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC016559.1-201ENST00000511420 199 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 SNORA14.1-201ENST00000516113 141 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 RNU6-1069P-201ENST00000516612 133 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 RNA5SP75-201ENST00000516841 111 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 OR7E96P-201ENST00000530816 976 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC018523.1-201ENST00000534211 512 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms