Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL354941.1-201ENST00000438600 464 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 CBX1P1-201ENST00000440184 427 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 MTND3P1-201ENST00000441336 220 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 RPL23AP76-201ENST00000441860 458 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 VN1R34P-201ENST00000447387 883 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AL109741.2-201ENST00000455561 343 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 RNU7-125P-201ENST00000458760 62 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 GLUD1P3-202ENST00000508551 200 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 XKRY-201ENST00000510392 1100 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 RNA5SP143-201ENST00000516936 115 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC138832.1-201ENST00000522871 556 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 OR8A2P-201ENST00000528631 952 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC060780.2-201ENST00000589047 198 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC024220.1-201ENST00000603675 484 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC055764.2-201ENST00000610089 670 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AL354976.1-201ENST00000613843 387 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC135068.5-201ENST00000624197 983 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 MIR4278-201ENST00000636094 69 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 OR56B2P-202ENST00000641377 2453 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 SGO1P1-201ENST00000603525 1447 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 A2MP1-204ENST00000566278 4130 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 SNORD116-9-201ENST00000384000 95 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 SNORD116-3-201ENST00000384287 95 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 SNORD116-7-201ENST00000384404 95 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 SNORD116-5-201ENST00000384462 95 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 SNORD56.6-201ENST00000384569 71 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 MIR16-1-201ENST00000385271 89 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 HNRNPDP2-201ENST00000406475 478 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 LUZP4P1-201ENST00000415420 344 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC016907.1-201ENST00000419483 435 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 PAICSP7-201ENST00000419829 962 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AL009174.1-201ENST00000426577 416 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 RPS24P8-201ENST00000431490 402 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 NPM1P18-201ENST00000434232 732 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC016831.4-201ENST00000438302 307 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 UBE2D3P4-201ENST00000441973 436 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 MED28P3-201ENST00000444288 531 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 RPL21P134-201ENST00000453468 483 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AL445669.2-201ENST00000454425 421 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AL133244.1-201ENST00000456007 258 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 RPL31P3-201ENST00000458430 332 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 GAPDHP36-201ENST00000480688 918 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC091435.1-201ENST00000505442 584 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC098799.3-201ENST00000506095 438 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC009852.2-201ENST00000567898 485 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 BPTFP1-201ENST00000579209 492 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 VN1R82P-201ENST00000601481 356 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC106791.2-201ENST00000604680 391 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC105129.3-201ENST00000605455 485 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AL451086.1-201ENST00000605596 223 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 Z95327.3-201ENST00000610385 572 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC079248.2-201ENST00000623779 326 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AP003400.3-201ENST00000624904 346 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC073869.7-201ENST00000640874 297 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 SMG1P7-201ENST00000565246 2704 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms