Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 Y_RNA.813-201ENST00000364639 102 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 RNY3P10-201ENST00000384764 102 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 ATP5HP3-201ENST00000396994 486 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 NRBF2P2-201ENST00000413087 861 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 RPS15AP38-201ENST00000413110 372 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC019050.1-201ENST00000418508 492 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 HMGN2P27-201ENST00000427352 270 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 MTCO1P48-201ENST00000448024 1096 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC079776.3-201ENST00000450665 370 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 BX842559.2-201ENST00000451418 605 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 DDX39BP2-208ENST00000453923 258 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 RPL5P24-201ENST00000463742 885 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC005532.2-201ENST00000467154 373 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 RPS18P6-201ENST00000476880 458 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 RN7SL629P-201ENST00000489622 285 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 NIFKP7-201ENST00000503365 834 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC117522.1-201ENST00000509821 380 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AP001646.1-201ENST00000527936 915 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AL121839.1-201ENST00000556233 1185 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC044913.1-201ENST00000557200 430 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 ATP5F1P7-201ENST00000567330 760 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AL137072.1-201ENST00000603444 466 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC069545.1-201ENST00000605671 358 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AP003117.2-201ENST00000606010 545 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC012360.2-201ENST00000609349 391 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 AC099063.3-201ENST00000642066 185 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 RNU6-259P-201ENST00000383999 107 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 TAF9BP1-201ENST00000396646 746 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC017078.1-201ENST00000416146 368 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 RPA2P2-201ENST00000419698 796 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 RPL7P44-201ENST00000424827 742 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC005033.1-201ENST00000428904 813 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AL136231.1-201ENST00000429407 730 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 YWHAEP5-201ENST00000431545 765 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 RPL5P25-201ENST00000441148 775 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AMD1P1-201ENST00000457220 922 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 RN7SL177P-201ENST00000476596 299 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC006499.5-201ENST00000505037 514 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 RNU6-718P-201ENST00000516166 105 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 RNU6-506P-201ENST00000516553 94 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC023632.1-201ENST00000518463 375 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC138832.1-201ENST00000522871 556 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms