Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 AC025263.3-201ENST00000622965 1396 ntBASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 RLIMP2-201ENST00000427891 1563 ntBASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
OTOP1Q7RTM1 AP002512.4-202ENST00000641599 4530 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 RNU1-74P-201ENST00000384108 171 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 SNORA48.4-201ENST00000391089 134 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 SNORA57.1-201ENST00000391227 145 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 Y_RNA.619-201ENST00000410951 90 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AL445213.1-201ENST00000412589 747 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 RPL19P16-201ENST00000433839 588 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC104306.1-201ENST00000449702 371 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 NCOR1P1-202ENST00000486162 291 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 RN7SL814P-201ENST00000487715 300 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 SETP14-201ENST00000497538 873 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AL035404.1-201ENST00000497982 568 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC010424.1-201ENST00000506336 297 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 RNU6-1225P-201ENST00000516336 65 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 Y_RNA.695-201ENST00000516715 107 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 NPM1P47-201ENST00000560843 856 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 RN7SL690P-201ENST00000582087 240 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC103881.1-201ENST00000603476 538 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AL136981.2-201ENST00000617319 734 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 MIR6839-201ENST00000620425 113 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC127502.3-201ENST00000636170 1206 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC109315.1-201ENST00000584143 1347 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AC011477.1-204ENST00000623416 1325 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 ZNF833P-201ENST00000424938 1494 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 SAMMSON-226ENST00000642089 1582 ntBASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
OTOP1Q7RTM1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 RNF6P1-201ENST00000444889 1784 ntBASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 Y_RNA.311-201ENST00000365068 96 ntBASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 MIR137-201ENST00000385223 102 ntBASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 RNA5SP241-201ENST00000391326 114 ntBASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 AL161449.1-201ENST00000414531 1199 ntBASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 AL161722.2-201ENST00000434731 981 ntBASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.86□□□□□ -1.47
OTOP1Q7RTM1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms