Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 RPL22P22-201ENST00000395439 379 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 RPL7P27-201ENST00000403775 720 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 MIR1250-201ENST00000408098 113 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 RN7SKP267-201ENST00000410381 285 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC004987.3-201ENST00000413879 771 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 ATG4AP1-201ENST00000416893 538 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 RBMY2KP-201ENST00000418221 992 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AL009174.1-201ENST00000426577 416 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AL513175.1-201ENST00000431492 780 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC016831.4-201ENST00000438302 307 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC012170.1-201ENST00000495139 359 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC119751.1-201ENST00000513357 765 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 RN7SKP234-201ENST00000517173 224 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC068620.3-201ENST00000602749 560 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC018645.2-201ENST00000609151 472 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AL023881.1-201ENST00000621088 301 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC004232.3-201ENST00000622977 525 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 AL627171.1-201ENST00000618845 1308 ntBASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NHLRC1Q6VVB1 SGO1P1-201ENST00000603525 1447 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC016716.1-201ENST00000265882 708 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 OR4K17-201ENST00000315543 1032 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 SNORA70E-201ENST00000384492 135 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 MIR585-201ENST00000384887 94 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 DSTNP4-201ENST00000399472 474 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 FABP12P1-201ENST00000401911 322 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 RN7SKP216-201ENST00000411050 312 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AL139128.1-201ENST00000413921 941 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 PTP4A1P7-201ENST00000423476 514 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC073648.4-201ENST00000442655 781 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 snoU13.7-201ENST00000459220 104 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC146507.1-201ENST00000468335 354 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 NAMPTP2-201ENST00000505629 1115 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 DEFB109D-201ENST00000529497 240 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 OR8K4P-201ENST00000534608 872 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC006518.2-201ENST00000542513 940 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 RN7SL690P-201ENST00000582087 240 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AP001180.3-201ENST00000582221 145 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 ELOCP28-201ENST00000590044 317 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC104785.1-201ENST00000603220 588 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC023762.1-201ENST00000603280 584 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 LINC00901.1-201ENST00000617252 152 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC091953.3-201ENST00000623220 236 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms