Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 HMGB1P21-201ENST00000502313 581 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 HSPE1P23-201ENST00000509838 286 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 XKRY-201ENST00000510392 1100 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 HMGB3P13-201ENST00000511263 607 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC104057.1-201ENST00000515547 497 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 RNU6-759P-201ENST00000516740 103 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC010547.6-201ENST00000571789 193 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 RN7SL176P-201ENST00000580352 264 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 PIGPP4-201ENST00000584447 307 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC233280.2-201ENST00000603917 1070 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC010857.1-201ENST00000606398 594 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC072039.2-201ENST00000608883 439 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AL118522.2-201ENST00000616045 615 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC093535.2-201ENST00000624769 2326 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AL445523.1-201ENST00000451184 1362 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC011978.2-201ENST00000569835 2054 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC011477.1-204ENST00000623416 1325 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 RN7SKP224-201ENST00000364140 325 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 RPL23AP29-201ENST00000397284 453 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 RPS15AP38-201ENST00000413110 372 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 COX6CP15-201ENST00000426313 211 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC094085.1-201ENST00000468914 584 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 RPL30P6-201ENST00000475925 342 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 MTCYBP17-201ENST00000503579 789 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 MTND6P2-201ENST00000512226 524 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC024940.3-201ENST00000538551 316 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AL049872.1-201ENST00000556323 322 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AP005403.1-201ENST00000579720 229 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AP005119.2-201ENST00000579735 1105 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 RN7SL356P-201ENST00000582228 248 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 RNF138P2-201ENST00000603490 592 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC018714.1-201ENST00000605028 208 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AC109583.2-201ENST00000617367 129 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 MIR6839-201ENST00000620425 113 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 CU639417.4-201ENST00000623928 207 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 272 ms