Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 SNORD108-201ENST00000459332 71 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 RPS23P1-201ENST00000491662 432 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 RPL7P24-201ENST00000493052 752 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC105233.1-201ENST00000498840 781 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 OR7E10P-201ENST00000526420 991 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC092747.2-201ENST00000545069 983 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC044860.2-201ENST00000561005 179 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC011492.1-201ENST00000600023 315 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AL161729.3-201ENST00000603533 673 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC093765.1-201ENST00000603758 881 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC138649.5-201ENST00000637456 137 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AL133383.2-201ENST00000622958 2336 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CCDC58Q4VC31 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.85
CCDC58Q4VC31 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 RPL7AP73-201ENST00000413490 353 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 OR5AW1P-201ENST00000426334 1006 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 RPS29P17-201ENST00000430795 166 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 RPL38P1-201ENST00000460914 211 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 TRBV8-2-201ENST00000475637 270 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AL121576.1-201ENST00000556055 276 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AC005191.1-201ENST00000603950 358 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AL589935.2-201ENST00000616471 1231 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AP003497.2-201ENST00000624220 967 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 SNORA50A-202ENST00000629536 136 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 AL139254.3-201ENST00000641097 674 ntBASIC3.52□□□□□ -1.85
CCDC58Q4VC31 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
CCDC58Q4VC31 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 SNORA11.3-201ENST00000408471 128 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 RPL31P12-201ENST00000422587 358 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AC098824.1-201ENST00000453565 980 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 MTND2P28-201ENST00000457540 1044 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AC006463.2-201ENST00000473326 348 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 OR5D17P-201ENST00000531492 978 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 TVP23BP1-201ENST00000557500 617 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 ZNF192P1-203ENST00000565888 810 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 CYP2C60P-201ENST00000566088 139 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AC006270.2-201ENST00000578523 652 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 PSMA6P4-201ENST00000603247 718 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AC010680.4-201ENST00000605334 543 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 MIR6862-1-201ENST00000613016 70 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 MIR6862-2-201ENST00000614755 70 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 MIR7151-201ENST00000617477 60 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 MIR6729-201ENST00000618194 65 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 SNORA11.6-201ENST00000619030 128 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AL139089.1-201ENST00000620372 975 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 AC091953.3-201ENST00000623220 236 ntBASIC3.51□□□□□ -1.85
CCDC58Q4VC31 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC58Q4VC31 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 AL035419.1-201ENST00000397037 564 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms