Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 GNG5P5-201ENST00000420444 220 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 MTND4P6-201ENST00000438297 472 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 RPL23AP16-201ENST00000441715 421 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 RPL26P28-201ENST00000451325 435 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 USP9YP10-201ENST00000454868 628 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 ELL2P3-201ENST00000457883 1602 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 RPL31P3-201ENST00000458430 332 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC092754.2-201ENST00000463506 460 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 MTND3P7-201ENST00000474435 343 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 USP9YP5-201ENST00000511770 630 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC018797.3-201ENST00000513388 1241 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 RNU6-583P-201ENST00000516012 92 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 RNU6-759P-201ENST00000516740 103 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC022790.1-201ENST00000522872 204 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC040958.1-201ENST00000561102 201 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 MTCYBP13-201ENST00000578634 1093 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SNORD39.3-201ENST00000584451 71 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AL590229.1-201ENST00000603497 542 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC100827.5-201ENST00000615883 426 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC068722.2-201ENST00000618734 544 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC138965.3-201ENST00000623875 498 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC092184.1-201ENST00000625042 715 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 FP325313.1-201ENST00000638228 703 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC068137.4-201ENST00000638485 296 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC011978.2-201ENST00000569835 2054 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AL079343.1-201ENST00000572358 1771 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 SNORA17.1-201ENST00000362945 126 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RN7SKP103-201ENST00000363848 320 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RNU6-1293P-201ENST00000384077 107 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 SEPT2P1-201ENST00000419651 180 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RIMKLBP2-201ENST00000424737 654 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RPL7P56-201ENST00000429441 717 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 FABP7P2-201ENST00000429946 379 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RPL12P18-201ENST00000437175 325 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RPS11P7-201ENST00000442125 465 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 CEACAMP9-201ENST00000442990 513 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 H2AFZP6-201ENST00000444403 394 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 Z80107.2-201ENST00000445127 392 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 MTND1P29-201ENST00000448112 647 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 PRPF38AP1-201ENST00000451976 933 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC087879.1-201ENST00000474343 374 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 ENPP7P11-201ENST00000505915 627 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC005178.1-201ENST00000508392 440 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC016559.2-201ENST00000510759 359 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 NPM1P6-201ENST00000521088 871 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AP001922.4-201ENST00000526967 290 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AP004607.2-201ENST00000533949 322 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC084824.1-201ENST00000550917 1005 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 MIR4504-201ENST00000577413 92 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC015726.1-201ENST00000602353 681 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RNU6-156P-201ENST00000621869 107 ntBASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms