Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CBX1P83916 RNF6P1-201ENST00000444889 1784 ntBASIC4.21□□□□□ -1.74
CBX1P83916 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CBX1P83916 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CBX1P83916 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CBX1P83916 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.21□□□□□ -1.74
CBX1P83916 AC073073.2-201ENST00000609827 2578 ntBASIC4.2□□□□□ -1.74
CBX1P83916 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 C4BPAP1-201ENST00000415474 1893 ntBASIC4.2□□□□□ -1.74
CBX1P83916 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CBX1P83916 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.2□□□□□ -1.74
CBX1P83916 AC010385.1-201ENST00000412374 256 ntBASIC4.2□□□□□ -1.74
CBX1P83916 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AL049610.1-201ENST00000423374 372 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AP001324.1-201ENST00000428553 399 ntBASIC4.2□□□□□ -1.74
CBX1P83916 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.2□□□□□ -1.74
CBX1P83916 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.2□□□□□ -1.74
CBX1P83916 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.2□□□□□ -1.74
CBX1P83916 USP9YP7-201ENST00000436723 430 ntBASIC4.2□□□□□ -1.74
CBX1P83916 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.2□□□□□ -1.74
CBX1P83916 USP9YP32-201ENST00000452432 430 ntBASIC4.2□□□□□ -1.74
CBX1P83916 RN7SL826P-201ENST00000479724 288 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.2□□□□□ -1.74
CBX1P83916 AC023050.1-201ENST00000498198 304 ntBASIC4.2□□□□□ -1.74
CBX1P83916 ARL2BPP6-201ENST00000512757 439 ntBASIC4.2□□□□□ -1.74
CBX1P83916 FTH1P9-201ENST00000513251 355 ntBASIC4.2□□□□□ -1.74
CBX1P83916 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.2□□□□□ -1.74
CBX1P83916 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.2□□□□□ -1.74
CBX1P83916 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 AP002812.4-201ENST00000532139 286 ntBASIC4.2□□□□□ -1.74
CBX1P83916 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 AC025260.1-201ENST00000548858 430 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.2□□□□□ -1.74
CBX1P83916 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.2□□□□□ -1.74
CBX1P83916 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.2□□□□□ -1.74
CBX1P83916 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.2□□□□□ -1.74
CBX1P83916 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.2□□□□□ -1.74
CBX1P83916 AC011477.5-201ENST00000586571 259 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AC115085.1-201ENST00000588924 229 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CBX1P83916 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.2□□□□□ -1.74
CBX1P83916 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.2□□□□□ -1.74
CBX1P83916 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.2□□□□□ -1.74
CBX1P83916 AC093765.1-201ENST00000603758 881 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AC010857.1-201ENST00000606398 594 ntBASIC4.2□□□□□ -1.74
CBX1P83916 MIR6862-1-201ENST00000613016 70 ntBASIC4.2□□□□□ -1.74
CBX1P83916 MIR6862-2-201ENST00000614755 70 ntBASIC4.2□□□□□ -1.74
CBX1P83916 AL139089.1-201ENST00000620372 975 ntBASIC4.2□□□□□ -1.74
CBX1P83916 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 GTF2H2B-203ENST00000508065 1432 ntBASIC4.2□□□□□ -1.74
CBX1P83916 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CBX1P83916 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.2□□□□□ -1.74
CBX1P83916 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.2□□□□□ -1.74
CBX1P83916 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.19□□□□□ -1.74
CBX1P83916 AC009501.3-201ENST00000605001 1352 ntBASIC4.19□□□□□ -1.74
CBX1P83916 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CBX1P83916 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.19□□□□□ -1.74
CBX1P83916 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.19□□□□□ -1.74
CBX1P83916 AC114495.1-201ENST00000441274 436 ntBASIC4.19□□□□□ -1.74
CBX1P83916 CEACAMP7-201ENST00000444105 496 ntBASIC4.19□□□□□ -1.74
CBX1P83916 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.19□□□□□ -1.74
CBX1P83916 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CBX1P83916 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.19□□□□□ -1.74
CBX1P83916 SCARNA22-201ENST00000503991 125 ntBASIC4.19□□□□□ -1.74
CBX1P83916 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.19□□□□□ -1.74
CBX1P83916 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CBX1P83916 PCBP2P3-201ENST00000509726 843 ntBASIC4.19□□□□□ -1.74
CBX1P83916 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.19□□□□□ -1.74
CBX1P83916 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.19□□□□□ -1.74
CBX1P83916 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.19□□□□□ -1.74
CBX1P83916 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.19□□□□□ -1.74
CBX1P83916 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.19□□□□□ -1.74
CBX1P83916 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.19□□□□□ -1.74
CBX1P83916 MIR3691-201ENST00000578066 90 ntBASIC4.19□□□□□ -1.74
CBX1P83916 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.19□□□□□ -1.74
CBX1P83916 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.19□□□□□ -1.74
CBX1P83916 AP003117.1-201ENST00000602771 554 ntBASIC4.19□□□□□ -1.74
CBX1P83916 ABI1P1-201ENST00000603375 1120 ntBASIC4.19□□□□□ -1.74
CBX1P83916 KATNBL1P1-201ENST00000605192 748 ntBASIC4.19□□□□□ -1.74
CBX1P83916 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.19□□□□□ -1.74
CBX1P83916 AC100814.1-201ENST00000606963 623 ntBASIC4.19□□□□□ -1.74
CBX1P83916 AL162233.1-201ENST00000620014 944 ntBASIC4.19□□□□□ -1.74
CBX1P83916 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.19□□□□□ -1.74
CBX1P83916 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CBX1P83916 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CBX1P83916 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CBX1P83916 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CBX1P83916 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CBX1P83916 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CBX1P83916 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.18□□□□□ -1.74
CBX1P83916 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CBX1P83916 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CBX1P83916 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms