Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN6P56747 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN6P56747 AL034408.1-202ENST00000636088 415 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN6P56747 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN6P56747 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CLDN6P56747 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 OR4A15-201ENST00000314706 1035 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 OR52B1P-201ENST00000316506 909 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 RNU1-108P-201ENST00000362556 161 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 RNU6-213P-201ENST00000384051 104 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 RNU1-44P-201ENST00000384453 163 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CLDN6P56747 RN7SKP156-201ENST00000410308 342 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 SNORA74C-2-201ENST00000411179 201 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AC062016.2-201ENST00000420950 676 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 EIF4EP1-201ENST00000422311 642 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AC073464.3-201ENST00000422564 712 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 EIF1P3-201ENST00000423841 334 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN6P56747 RPS11P1-201ENST00000451072 473 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 VN1R32P-201ENST00000452234 905 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 snoU13.24-201ENST00000458998 104 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
CLDN6P56747 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN6P56747 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.94□□□□□ -1.78
CLDN6P56747 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN6P56747 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.94□□□□□ -1.78
CLDN6P56747 SMARCE1P4-201ENST00000523647 241 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AC022882.1-201ENST00000532142 501 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.94□□□□□ -1.78
CLDN6P56747 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN6P56747 AC027176.2-201ENST00000559166 746 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN6P56747 AC110743.1-201ENST00000584870 478 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AC015726.1-201ENST00000602353 681 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AC084757.4-201ENST00000616350 526 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AC023509.5-201ENST00000617434 807 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 AL669942.2-201ENST00000620352 697 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN6P56747 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 SYT14P1-202ENST00000600441 1448 ntBASIC3.94□□□□□ -1.78
CLDN6P56747 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CLDN6P56747 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN6P56747 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN6P56747 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN6P56747 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN6P56747 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN6P56747 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN6P56747 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
CLDN6P56747 RNA5SP22-201ENST00000365393 109 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 MIR491-201ENST00000384877 84 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 MIR483-201ENST00000385070 76 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CLDN6P56747 SNORA11.2-201ENST00000408318 127 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.93□□□□□ -1.78
CLDN6P56747 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN6P56747 AL450992.3-201ENST00000413192 568 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 SEC63P1-201ENST00000425785 1258 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN6P56747 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN6P56747 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN6P56747 RPL38P1-201ENST00000460914 211 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 RPS26P28-201ENST00000470806 348 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 AC005912.1-201ENST00000495392 255 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 AL139099.1-201ENST00000497398 403 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN6P56747 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN6P56747 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN6P56747 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN6P56747 AC084033.1-201ENST00000550830 633 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.93□□□□□ -1.78
CLDN6P56747 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN6P56747 AC096577.2-201ENST00000611455 153 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 AC009237.17-201ENST00000618111 748 ntBASIC3.93□□□□□ -1.78
CLDN6P56747 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms