Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.21□□□□□ -1.58
NEK3P51956 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.21□□□□□ -1.58
NEK3P51956 COX7BP2-201ENST00000437976 242 ntBASIC5.21□□□□□ -1.58
NEK3P51956 RPL12P3-201ENST00000440080 396 ntBASIC5.21□□□□□ -1.58
NEK3P51956 AL357520.1-201ENST00000441557 453 ntBASIC5.21□□□□□ -1.58
NEK3P51956 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.21□□□□□ -1.58
NEK3P51956 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.21□□□□□ -1.58
NEK3P51956 MTCO3P2-201ENST00000457365 171 ntBASIC5.21□□□□□ -1.58
NEK3P51956 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEK3P51956 ACTG1P13-201ENST00000486987 1043 ntBASIC5.21□□□□□ -1.58
NEK3P51956 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.21□□□□□ -1.58
NEK3P51956 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.21□□□□□ -1.58
NEK3P51956 AC021146.5-201ENST00000503544 545 ntBASIC5.21□□□□□ -1.58
NEK3P51956 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.21□□□□□ -1.58
NEK3P51956 AC008837.2-201ENST00000513076 418 ntBASIC5.21□□□□□ -1.58
NEK3P51956 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.21□□□□□ -1.58
NEK3P51956 AC105031.1-201ENST00000518550 476 ntBASIC5.21□□□□□ -1.58
NEK3P51956 C1GALT1P3-201ENST00000522049 819 ntBASIC5.21□□□□□ -1.58
NEK3P51956 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.21□□□□□ -1.58
NEK3P51956 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 OR4A12P-201ENST00000530847 918 ntBASIC5.21□□□□□ -1.58
NEK3P51956 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.21□□□□□ -1.58
NEK3P51956 LSM6P2-201ENST00000552208 177 ntBASIC5.21□□□□□ -1.58
NEK3P51956 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 AL132657.2-201ENST00000564417 358 ntBASIC5.21□□□□□ -1.58
NEK3P51956 AL451074.6-201ENST00000608512 729 ntBASIC5.21□□□□□ -1.58
NEK3P51956 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 AC021755.4-201ENST00000616620 456 ntBASIC5.21□□□□□ -1.58
NEK3P51956 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEK3P51956 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NEK3P51956 AC107982.1-201ENST00000507171 1300 ntBASIC5.21□□□□□ -1.58
NEK3P51956 AC109315.1-201ENST00000584143 1347 ntBASIC5.21□□□□□ -1.58
NEK3P51956 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.21□□□□□ -1.58
NEK3P51956 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NEK3P51956 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 ZNF876P-202ENST00000398732 1485 ntBASIC5.2□□□□□ -1.58
NEK3P51956 CDR1-202ENST00000625883 1485 ntBASIC5.2□□□□□ -1.58
NEK3P51956 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.2□□□□□ -1.58
NEK3P51956 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NEK3P51956 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NEK3P51956 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 RNU5D-1-201ENST00000363299 116 ntBASIC5.2□□□□□ -1.58
NEK3P51956 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NEK3P51956 SSXP10-201ENST00000402595 565 ntBASIC5.2□□□□□ -1.58
NEK3P51956 MIR1271-201ENST00000408537 86 ntBASIC5.2□□□□□ -1.58
NEK3P51956 RNA5SP80-201ENST00000410475 111 ntBASIC5.2□□□□□ -1.58
NEK3P51956 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.2□□□□□ -1.58
NEK3P51956 OR2AH1P-201ENST00000425717 928 ntBASIC5.2□□□□□ -1.58
NEK3P51956 AC009238.2-201ENST00000431026 355 ntBASIC5.2□□□□□ -1.58
NEK3P51956 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 VN1R54P-201ENST00000435210 1049 ntBASIC5.2□□□□□ -1.58
NEK3P51956 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.2□□□□□ -1.58
NEK3P51956 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.2□□□□□ -1.58
NEK3P51956 RPL23AP16-201ENST00000441715 421 ntBASIC5.2□□□□□ -1.58
NEK3P51956 CEACAMP9-201ENST00000442990 513 ntBASIC5.2□□□□□ -1.58
NEK3P51956 Z77249.1-201ENST00000444622 1175 ntBASIC5.2□□□□□ -1.58
NEK3P51956 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.2□□□□□ -1.58
NEK3P51956 MTCO1P48-201ENST00000448024 1096 ntBASIC5.2□□□□□ -1.58
NEK3P51956 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.2□□□□□ -1.58
NEK3P51956 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.2□□□□□ -1.58
NEK3P51956 AL133477.1-201ENST00000457472 514 ntBASIC5.2□□□□□ -1.58
NEK3P51956 AC010301.1-201ENST00000473936 355 ntBASIC5.2□□□□□ -1.58
NEK3P51956 MTND2P14-201ENST00000482139 351 ntBASIC5.2□□□□□ -1.58
NEK3P51956 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 AC079395.1-201ENST00000510981 262 ntBASIC5.2□□□□□ -1.58
NEK3P51956 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.2□□□□□ -1.58
NEK3P51956 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.2□□□□□ -1.58
NEK3P51956 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.2□□□□□ -1.58
NEK3P51956 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.2□□□□□ -1.58
NEK3P51956 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.2□□□□□ -1.58
NEK3P51956 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.2□□□□□ -1.58
NEK3P51956 AC087465.1-201ENST00000560574 245 ntBASIC5.2□□□□□ -1.58
NEK3P51956 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 OR4K7P-201ENST00000580232 945 ntBASIC5.2□□□□□ -1.58
NEK3P51956 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.2□□□□□ -1.58
NEK3P51956 GAS5-AS1-201ENST00000602767 694 ntBASIC5.2□□□□□ -1.58
NEK3P51956 AC015871.5-202ENST00000623252 701 ntBASIC5.2□□□□□ -1.58
NEK3P51956 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
NEK3P51956 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEK3P51956 SMG1P4-204ENST00000523028 4131 ntBASIC5.2□□□□□ -1.58
NEK3P51956 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.2□□□□□ -1.58
NEK3P51956 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms