Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCNKAP51800 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 AC099786.3-201ENST00000565735 1410 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCNKAP51800 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCNKAP51800 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLCNKAP51800 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CLCNKAP51800 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLCNKAP51800 SNORA62.2-201ENST00000364672 152 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 SNORA71.2-201ENST00000364941 134 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 MIR92A2-201ENST00000385299 75 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCNKAP51800 CYCSP10-201ENST00000417973 294 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.56□□□□□ -1.68
CLCNKAP51800 RPS27AP7-201ENST00000422792 455 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 C1DP1-201ENST00000426049 402 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC092634.2-201ENST00000428146 1010 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCNKAP51800 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 NMNAT1P2-201ENST00000435192 860 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCNKAP51800 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCNKAP51800 VN1R25P-201ENST00000443385 738 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 MTND1P31-201ENST00000449206 961 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 ZNF886P-201ENST00000450781 723 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 PTGES3P5-201ENST00000455109 434 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 NDUFA12P1-201ENST00000455914 406 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC104763.1-201ENST00000475274 360 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC005912.1-201ENST00000495392 255 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 MTCYBP35-201ENST00000503630 1137 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCNKAP51800 HMGB1P1-201ENST00000522557 636 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC083923.1-201ENST00000523708 376 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCNKAP51800 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCNKAP51800 NPM1P47-201ENST00000560843 856 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.56□□□□□ -1.68
CLCNKAP51800 AC023824.3-201ENST00000569003 562 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AP005119.2-201ENST00000579735 1105 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 MIR5096-201ENST00000583713 70 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCNKAP51800 Z99289.3-201ENST00000605586 594 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCNKAP51800 AC139769.3-201ENST00000618383 175 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC123767.1-202ENST00000620407 817 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AL121594.5-201ENST00000631724 573 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CLCNKAP51800 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 AC108467.2-201ENST00000617640 1597 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCNKAP51800 SEC63P2-201ENST00000503863 1939 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 Z73965.1-201ENST00000623412 2297 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 AC074029.4-201ENST00000624796 1859 ntBASIC4.56□□□□□ -1.68
CLCNKAP51800 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AC135352.1-201ENST00000506173 1418 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCNKAP51800 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 AC073055.1-201ENST00000456901 1621 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCNKAP51800 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 RNU6-353P-201ENST00000364266 108 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 Y_RNA.472-201ENST00000384322 102 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 SNORD116-12-201ENST00000384468 92 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 MIR129-1-201ENST00000384972 72 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AL080315.1-201ENST00000406055 466 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 RN7SKP216-201ENST00000411050 312 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 RPS7P9-201ENST00000414704 586 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 VPS26BP1-201ENST00000417155 755 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCNKAP51800 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCNKAP51800 RPS26P30-201ENST00000443431 335 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCNKAP51800 TPT1P13-201ENST00000449760 499 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms